RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 RAD51BO15315 384 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 SYNCRIPO60506 623 aaKnown RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 ENO2P09104 434 aaPredicted RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 ETS2P15036 469 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 MSH3P20585 1137 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 MYF6P23409 242 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 RGS4P49798 205 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 AGTR2P50052 363 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 HK3P52790 923 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 DIO3P55073 304 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 ARF5P84085 180 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 EMX2Q04743 252 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 LIPEQ05469 1076 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 PRKG2Q13237 762 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 SKIV2LQ15477 1246 aaKnown RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 FXNQ16595 210 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 METTL2BQ6P1Q9 378 aaKnown RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 RNF165Q6ZSG1 346 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 ZFAND4Q86XD8 727 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 CPNE9Q8IYJ1 553 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 AADATQ8N5Z0 425 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 HJURPQ8NCD3 748 aaPredicted RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 PHOSPHO2Q8TCD6 241 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 EEF1AKMT1Q8WVE0 214 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 ZNF689Q96CS4 500 aaPredicted RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 MPP4Q96JB8 637 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 SLC30A3Q99726 388 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 DUS2Q9NX74 493 aaKnown RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 IL17CQ9P0M4 197 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 LHX3Q9UBR4 397 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 MAGEL2Q9UJ55 1249 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 PCDHGB4Q9UN71 923 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 PCDHGB5Q9Y5G0 923 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 PRUNE2Q8WUY3 3088 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 SPTBN5Q9NRC6 3674 aaKnown RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 A0A087WXM4 84 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 TCRBV5S2A0A599 114 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 NCF1BA6NI72 391 aaPredicted RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 NCF1CA8MVU1 366 aaPredicted RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 PDLIM1O00151 329 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 ARNTLO00327 626 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 SOCS2O14508 198 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 FZD6O60353 706 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 OR4F21O95013 312 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 RASAL1O95294 804 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 OTCP00480 354 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 KLKB1P03952 638 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 SOD2P04179 222 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 CA3P07451 260 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 NCF1P14598 390 aaPredicted RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 HMGA1P17096 107 aaKnown RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 ZNF7P17097 686 aaPredicted RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 CKMT2P17540 419 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 MAPK8P45983 427 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 ZFP36L2P47974 494 aaKnown RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 CDKN1CP49918 316 aaPredicted RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 CCT8P50990 548 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 CLCN7P51798 805 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 RHOAP61586 193 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 PLOD1Q02809 727 aaPredicted RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 VEPH1Q14D04 833 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 TGFBIQ15582 683 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 TAF12Q16514 161 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 CYP51A1Q16850 503 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 C6orf136Q5SQH8 315 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 FKBP9P1Q75LS8 142 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 TMCO2Q7Z6W1 182 aaPredicted RBP13.75□□□□□ -0.21
HMGCL-203ENST00000374490 CBR4Q8N4T8 237 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 FNDC5Q8NAU1 212 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 LEMD2Q8NC56 503 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 MYO19Q96H55 970 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 YME1L1Q96TA2 773 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 ZBED2Q9BTP6 218 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 LRRC3Q9BY71 257 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 GPR63Q9BZJ6 419 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 GALPQ9UBC7 116 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 EGFL7Q9UHF1 273 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 GNPTGQ9UJJ9 305 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 ZNF225Q9UK10 706 aa13.75□□□□□ -0.21
HMGCL-203ENST00000374490 A0A1B0GTL3 188 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.74□□□□□ -0.21
HMGCL-203ENST00000374490 SAC3D1A6NKF1 404 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 OR1I1O60431 355 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 EFEMP2O95967 443 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 GLUD1P00367 558 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 C1RP00736 705 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 URODP06132 367 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 COL9A1P20849 921 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 OR1D2P34982 312 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 HMGCLP35914 325 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 SGSHP51688 502 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 UFM1P61960 85 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 ECT2LQ008S8 904 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 MAD2L1Q13257 205 aaPredicted RBP13.74□□□□□ -0.21
HMGCL-203ENST00000374490 CRY1Q16526 586 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 ARMC12Q5T9G4 340 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 TPGS2Q68CL5 300 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 HID1Q8IV36 788 aa13.74□□□□□ -0.21
HMGCL-203ENST00000374490 RNF168Q8IYW5 571 aaPredicted RBP13.74□□□□□ -0.21
HMGCL-203ENST00000374490 SLC39A11Q8N1S5 342 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms