RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 CATSPERZQ9NTU4 200 aa11.79□□□□□ -0.52
HDAC8-201ENST00000373554 SCHIP1Q9P0W5 487 aaPredicted RBP11.79□□□□□ -0.52
HDAC8-201ENST00000373554 DKK4Q9UBT3 224 aa11.79□□□□□ -0.52
HDAC8-201ENST00000373554 ACSL5Q9ULC5 683 aa11.79□□□□□ -0.52
HDAC8-201ENST00000373554 SOX13Q9UN79 622 aa11.79□□□□□ -0.52
HDAC8-201ENST00000373554 PSMD13Q9UNM6 376 aa11.79□□□□□ -0.52
HDAC8-201ENST00000373554 IGF2RP11717 2491 aa11.79□□□□□ -0.52
HDAC8-201ENST00000373554 COL27A1Q8IZC6 1860 aaPredicted RBP11.78□□□□□ -0.52
HDAC8-201ENST00000373554 FASNP49327 2511 aaKnown RBP11.78□□□□□ -0.52
HDAC8-201ENST00000373554 C17orf113A0A1B0GUU1 675 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 LILRA5A6NI73 299 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 SDR42E2A6NKP2 422 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 AVILO75366 819 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 FTH1P02794 183 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 PAMP19021 973 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 NMBRP28336 390 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 CD1CP29017 333 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 SLC19A1P41440 591 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 PTGIRP43119 386 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 MAPK9P45984 424 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 LSSP48449 732 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 TTPAP49638 278 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 PHF19Q5T6S3 580 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 RNASEH2BQ5TBB1 312 aaKnown RBP11.78□□□□□ -0.52
HDAC8-201ENST00000373554 ZNF449Q6P9G9 518 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 USP53Q70EK8 1073 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 PCGF5Q86SE9 256 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 CAND1Q86VP6 1230 aaKnown RBP11.78□□□□□ -0.52
HDAC8-201ENST00000373554 JAMLQ86YT9 394 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 SLITRK4Q8IW52 837 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 CFAP206Q8IYR0 622 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 LSMEM2Q8N112 164 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 MPP5Q8N3R9 675 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 OTUD6BQ8N6M0 293 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 NAT8LQ8N9F0 302 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 WDR36Q8NI36 951 aaKnown RBP11.78□□□□□ -0.52
HDAC8-201ENST00000373554 NUDT22Q9BRQ3 303 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 CCM2Q9BSQ5 444 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 WWP1Q9H0M0 922 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 COG4Q9H9E3 785 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 UCK1Q9HA47 277 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 IMP3Q9NV31 184 aaKnown RBP11.78□□□□□ -0.52
HDAC8-201ENST00000373554 AKAP7Q9P0M2 348 aaPredicted RBP11.78□□□□□ -0.52
HDAC8-201ENST00000373554 ZNF624Q9P2J8 865 aaPredicted RBP11.78□□□□□ -0.52
HDAC8-201ENST00000373554 SATB2Q9UPW6 733 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 WDR37Q9Y2I8 494 aa11.78□□□□□ -0.52
HDAC8-201ENST00000373554 MAGEB16A2A368 324 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 DNALI1O14645 258 aaPredicted RBP11.77□□□□□ -0.53
HDAC8-201ENST00000373554 PFDN6O15212 129 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 CD3EAPO15446 510 aaKnown RBP11.77□□□□□ -0.53
HDAC8-201ENST00000373554 BRINP1O60477 761 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 VAPBO95292 243 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 POLBP06746 335 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 OR56A5P0C7T3 313 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 MTHFD1P11586 935 aaKnown RBP11.77□□□□□ -0.53
HDAC8-201ENST00000373554 CSF2RBP32927 897 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 ZFP36L1Q07352 338 aaKnown RBP11.77□□□□□ -0.53
HDAC8-201ENST00000373554 SQSTM1Q13501 440 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 DHX34Q14147 1143 aaKnown RBP11.77□□□□□ -0.53
HDAC8-201ENST00000373554 CLCA4Q14CN2 919 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 RPE65Q16518 533 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 NKAIN2Q5VXU1 208 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 IZUMO3Q5VZ72 239 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 KIAA0930Q6ICG6 404 aaPredicted RBP11.77□□□□□ -0.53
HDAC8-201ENST00000373554 MRNIPQ6NTE8 343 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 FOXR1Q6PIV2 292 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 CES3Q6UWW8 571 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 TMEM26Q6ZUK4 368 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 HOOK3Q86VS8 718 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 PROSER1Q86XN7 944 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 OR4D9Q8NGE8 314 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 TMEM159Q96B96 161 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 ZNF669Q96BR6 464 aaPredicted RBP11.77□□□□□ -0.53
HDAC8-201ENST00000373554 MFSD3Q96ES6 412 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 C16orf45Q96MC5 204 aaPredicted RBP11.77□□□□□ -0.53
HDAC8-201ENST00000373554 C12orf66Q96MD2 445 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 TSSK1BQ9BXA7 367 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 TBC1D10AQ9BXI6 508 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 SLC40A1Q9NP59 571 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 ZMIZ1Q9ULJ6 1067 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 PCDHGA8Q9Y5G5 932 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 MAD1L1Q9Y6D9 718 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 FRYQ5TBA9 3013 aa11.77□□□□□ -0.53
HDAC8-201ENST00000373554 FAM237BA0A1B0GVD1 139 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 IFRD1O00458 451 aaPredicted RBP11.76□□□□□ -0.53
HDAC8-201ENST00000373554 LIN7AO14910 233 aaPredicted RBP11.76□□□□□ -0.53
HDAC8-201ENST00000373554 PLD2O14939 933 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 TTI1O43156 1089 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 OR1I1O60431 355 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 NDUFS3O75489 264 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 DXOO77932 396 aaKnown RBP11.76□□□□□ -0.53
HDAC8-201ENST00000373554 UBXN7O94888 489 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 CAPNS1P04632 268 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 JMJD7P0C870 316 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 RBMS1P29558 406 aaKnown RBP11.76□□□□□ -0.53
HDAC8-201ENST00000373554 MLLT3P42568 568 aaPredicted RBP11.76□□□□□ -0.53
HDAC8-201ENST00000373554 MAGEA3P43357 314 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 LIMK2P53671 638 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 RPA4Q13156 261 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 TRA2AQ13595 282 aaKnown RBP eCLIP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms