RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 SIRPGQ9P1W8 387 aa16.04■□□□□ 0.16
TMEM53-203ENST00000372242 PCDHGB2Q9Y5G2 931 aa16.04■□□□□ 0.16
TMEM53-203ENST00000372242 DNMT3AQ9Y6K1 912 aaPredicted RBP16.04■□□□□ 0.16
TMEM53-203ENST00000372242 B4DGG1 531 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 QSOX1O00391 747 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 RIPK2O43353 540 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 SH3BP5O60239 455 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 FTH1P02794 183 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 ESR1P03372 595 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 PKMP14618 531 aaKnown RBP16.03■□□□□ 0.16
TMEM53-203ENST00000372242 VCLP18206 1134 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 ZNF449Q6P9G9 518 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 XKR5Q6UX68 686 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 TRMT10CQ7L0Y3 403 aaKnown RBP16.03■□□□□ 0.16
TMEM53-203ENST00000372242 SARS2Q9NP81 518 aaKnown RBP16.03■□□□□ 0.16
TMEM53-203ENST00000372242 NLGN3Q9NZ94 848 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 GALPQ9UBC7 116 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 RAB21Q9UL25 225 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 PSMD13Q9UNM6 376 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 PCDHB1Q9Y5F3 818 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 PRR19A6NJB7 356 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 SIGLEC6O43699 453 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 FAM155BO75949 473 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 MYF5P13349 255 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 MCM3P25205 808 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 CCR7P32248 378 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 CD151P48509 253 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 CSE1LP55060 971 aaKnown RBP16.03■□□□□ 0.16
TMEM53-203ENST00000372242 BOP1Q14137 746 aaKnown RBP16.03■□□□□ 0.16
TMEM53-203ENST00000372242 ZNF658BQ4V348 819 aaPredicted RBP16.03■□□□□ 0.16
TMEM53-203ENST00000372242 RBM20Q5T481 1227 aaKnown RBP16.03■□□□□ 0.16
TMEM53-203ENST00000372242 SLC26A11Q86WA9 606 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 SDR16C5Q8N3Y7 309 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 OR4C6Q8NH72 309 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 RHBDD1Q8TEB9 315 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 AENQ8WTP8 325 aaKnown RBP16.03■□□□□ 0.16
TMEM53-203ENST00000372242 PATE1Q8WXA2 126 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 ELMO1Q92556 727 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 CCDC68Q9H2F9 335 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 EPB41L4BQ9H329 900 aa16.03■□□□□ 0.16
TMEM53-203ENST00000372242 ARID1BQ8NFD5 2236 aaPredicted RBP16.03■□□□□ 0.16
TMEM53-203ENST00000372242 ARHGEF17Q96PE2 2063 aaPredicted RBP16.02■□□□□ 0.16
TMEM53-203ENST00000372242 TRBV23OR9-2A0A075B6M9 112 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 FLRT2O43155 660 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 CHRM3P20309 590 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 GRK6P43250 576 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 PREPP48147 710 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 DMPKQ09013 629 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 SLC29A2Q14542 456 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 METRNLQ641Q3 311 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 LVRNQ6Q4G3 990 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 GALNT7Q86SF2 657 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 ZC3HC1Q86WB0 502 aaKnown RBP16.02■□□□□ 0.16
TMEM53-203ENST00000372242 NAXDQ8IW45 347 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 HM13Q8TCT9 377 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 CYTH2Q99418 400 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 ACSS3Q9H6R3 686 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 NSMCE4AQ9NXX6 385 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 TXNDC16Q9P2K2 825 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 WDR37Q9Y2I8 494 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 MED16Q9Y2X0 877 aa16.02■□□□□ 0.16
TMEM53-203ENST00000372242 C17orf113A0A1B0GUU1 675 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 PDZK1P1A8MUH7 402 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 TPP1O14773 563 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 ALPPL2P10696 532 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 IDSP22304 550 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 PDHA2P29803 388 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 CLCNKAP51800 687 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 PGGT1BP53609 377 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 C6orf132Q5T0Z8 1188 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 NAGSQ8N159 534 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 GPATCH11Q8N954 259 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 ACVR1CQ8NER5 493 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 SPDYE1Q8NFV5 336 aaPredicted RBP16.01■□□□□ 0.15
TMEM53-203ENST00000372242 ZDHHC1Q8WTX9 485 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 UBLCP1Q8WVY7 318 aaPredicted RBP16.01■□□□□ 0.15
TMEM53-203ENST00000372242 PANX3Q96QZ0 392 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 AARSD1Q9BTE6 412 aaKnown RBP16.01■□□□□ 0.15
TMEM53-203ENST00000372242 DUSP23Q9BVJ7 150 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 FUT8Q9BYC5 575 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 COG4Q9H9E3 785 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 SCHIP1Q9P0W5 487 aaPredicted RBP16.01■□□□□ 0.15
TMEM53-203ENST00000372242 A0A087WUV0 522 aaPredicted RBP16.01■□□□□ 0.15
TMEM53-203ENST00000372242 A6NCN8 305 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 E5RI56 91 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 F8W8V4 182 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 H3BMM5 538 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 BRAFP15056 766 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 AOAHP28039 575 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 LIMK1P53667 647 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 CDKN2DP55273 166 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 HSPA14Q0VDF9 509 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 OTOAQ7RTW8 1153 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 KYQ8NBH2 561 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 NETO1Q8TDF5 533 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 APOLD1Q96LR9 279 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 SLC30A3Q99726 388 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 CPNE1Q99829 537 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 MCMBPQ9BTE3 642 aa16.01■□□□□ 0.15
TMEM53-203ENST00000372242 TSSK1BQ9BXA7 367 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms