RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 SEC16BQ96JE7 1060 aa23.49■■□□□ 1.35
SNX3-203ENST00000368979 TMEM237Q96Q45 408 aa23.49■■□□□ 1.35
SNX3-203ENST00000368979 SORT1Q99523 831 aa23.49■■□□□ 1.35
SNX3-203ENST00000368979 BTBD1Q9H0C5 482 aa23.49■■□□□ 1.35
SNX3-203ENST00000368979 SGK2Q9HBY8 427 aa23.49■■□□□ 1.35
SNX3-203ENST00000368979 CYP4F12Q9HCS2 524 aa23.49■■□□□ 1.35
SNX3-203ENST00000368979 NCKIPSDQ9NZQ3 722 aa23.49■■□□□ 1.35
SNX3-203ENST00000368979 CDYLQ9Y232 598 aa23.49■■□□□ 1.35
SNX3-203ENST00000368979 C10orf142B7Z368 130 aa23.48■■□□□ 1.35
SNX3-203ENST00000368979 RAD51BO15315 384 aa23.48■■□□□ 1.35
SNX3-203ENST00000368979 KLK8O60259 260 aa23.48■■□□□ 1.35
SNX3-203ENST00000368979 GPC4O75487 556 aa23.48■■□□□ 1.35
SNX3-203ENST00000368979 OVGP1Q12889 678 aa23.48■■□□□ 1.35
SNX3-203ENST00000368979 GTF2H3Q13889 308 aa23.48■■□□□ 1.35
SNX3-203ENST00000368979 BOP1Q14137 746 aaKnown RBP23.48■■□□□ 1.35
SNX3-203ENST00000368979 INPP5AQ14642 412 aa23.48■■□□□ 1.35
SNX3-203ENST00000368979 OR2T34Q8NGX1 318 aa23.48■■□□□ 1.35
SNX3-203ENST00000368979 ELMO1Q92556 727 aa23.48■■□□□ 1.35
SNX3-203ENST00000368979 ZNF514Q96K75 400 aaPredicted RBP23.48■■□□□ 1.35
SNX3-203ENST00000368979 CCM2Q9BSQ5 444 aa23.48■■□□□ 1.35
SNX3-203ENST00000368979 DRC3Q9H069 523 aa23.48■■□□□ 1.35
SNX3-203ENST00000368979 TSR3Q9UJK0 312 aaKnown RBP23.48■■□□□ 1.35
SNX3-203ENST00000368979 NPHS1O60500 1241 aa23.47■■□□□ 1.35
SNX3-203ENST00000368979 ZNF8P17098 575 aaPredicted RBP23.47■■□□□ 1.35
SNX3-203ENST00000368979 MAT2AP31153 395 aaKnown RBP23.47■■□□□ 1.35
SNX3-203ENST00000368979 IGFALSP35858 605 aa23.47■■□□□ 1.35
SNX3-203ENST00000368979 HSPA14Q0VDF9 509 aa23.47■■□□□ 1.35
SNX3-203ENST00000368979 RCN2Q14257 317 aa23.47■■□□□ 1.35
SNX3-203ENST00000368979 PPP1R3AQ16821 1122 aa23.47■■□□□ 1.35
SNX3-203ENST00000368979 ZNF658BQ4V348 819 aaPredicted RBP23.47■■□□□ 1.35
SNX3-203ENST00000368979 PHF21BQ96EK2 531 aa23.47■■□□□ 1.35
SNX3-203ENST00000368979 L3HYPDHQ96EM0 354 aa23.47■■□□□ 1.35
SNX3-203ENST00000368979 LINC00615Q96LM1 132 aaPredicted RBP23.47■■□□□ 1.35
SNX3-203ENST00000368979 LGR4Q9BXB1 951 aa23.47■■□□□ 1.35
SNX3-203ENST00000368979 WDR26Q9H7D7 661 aa23.47■■□□□ 1.35
SNX3-203ENST00000368979 TBC1D17Q9HA65 648 aa23.47■■□□□ 1.35
SNX3-203ENST00000368979 GPR34Q9UPC5 381 aa23.47■■□□□ 1.35
SNX3-203ENST00000368979 TMEM202A6NGA9 273 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 LRRC72A6NJI9 287 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 SUPT3HB4E1H0 165 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 SUPT3HO75486 399 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 MPC1LP0DKB6 136 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 IMPDH1P20839 514 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 HK3P52790 923 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 SF3A3Q12874 501 aaKnown RBP eCLIP23.46■■□□□ 1.35
SNX3-203ENST00000368979 ANO7Q6IWH7 933 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 NEK10Q6ZWH5 1172 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 GPSM1Q86YR5 675 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 CRLF3Q8IUI8 442 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 VRK3Q8IV63 474 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 PGBD3Q8N328 593 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 PTGR2Q8N8N7 351 aaPredicted RBP23.46■■□□□ 1.35
SNX3-203ENST00000368979 TSTD1Q8NFU3 115 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 ASZ1Q8WWH4 475 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 MOCOSQ96EN8 888 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 FAM126AQ9BYI3 521 aaPredicted RBP23.46■■□□□ 1.35
SNX3-203ENST00000368979 ACSS2Q9NR19 701 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 KLHL14Q9P2G3 628 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 ADAMTS6Q9UKP5 1117 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 TMCO1Q9UM00 188 aa23.46■■□□□ 1.35
SNX3-203ENST00000368979 SLCO2B1O94956 709 aa23.45■■□□□ 1.34
SNX3-203ENST00000368979 TROVE2P10155 538 aaKnown RBP eCLIP23.45■■□□□ 1.34
SNX3-203ENST00000368979 SERPINB5P36952 375 aa23.45■■□□□ 1.34
SNX3-203ENST00000368979 TGFBIQ15582 683 aa23.45■■□□□ 1.34
SNX3-203ENST00000368979 TMEM31Q5JXX7 168 aa23.45■■□□□ 1.34
SNX3-203ENST00000368979 ZNF678Q5SXM1 525 aa23.45■■□□□ 1.34
SNX3-203ENST00000368979 ZNF547Q8IVP9 402 aa23.45■■□□□ 1.34
SNX3-203ENST00000368979 CACNA2D3Q8IZS8 1091 aa23.45■■□□□ 1.34
SNX3-203ENST00000368979 FBXO39Q8N4B4 442 aa23.45■■□□□ 1.34
SNX3-203ENST00000368979 CCDC197Q8NCU1 140 aa23.45■■□□□ 1.34
SNX3-203ENST00000368979 DENND6BQ8NEG7 585 aa23.45■■□□□ 1.34
SNX3-203ENST00000368979 HHIPQ96QV1 700 aa23.45■■□□□ 1.34
SNX3-203ENST00000368979 NUDT4Q9NZJ9 180 aa23.45■■□□□ 1.34
SNX3-203ENST00000368979 TMEM98Q9Y2Y6 226 aa23.45■■□□□ 1.34
SNX3-203ENST00000368979 OR1A2Q9Y585 309 aa23.45■■□□□ 1.34
SNX3-203ENST00000368979 A0A0C4DFX4 3053 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 SLC5A10A0PJK1 596 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 CHUKO15111 745 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 HSPA4LO95757 839 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 GSTM1P09488 218 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 GFAPP14136 432 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 HERVK_113P63132 956 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 GSTM4Q03013 218 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 PFKFB4Q16877 469 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 TRAPPC5Q8IUR0 188 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 CCNYL1Q8N7R7 359 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 PPP4R1Q8TF05 950 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 GLMNQ92990 594 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 THOC1Q96FV9 657 aaKnown RBP23.44■■□□□ 1.34
SNX3-203ENST00000368979 ERVK-6Q9BXR3 956 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 TRIM55Q9BYV6 548 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 NPHS2Q9NP85 383 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 PHPT1Q9NRX4 125 aaPredicted RBP23.44■■□□□ 1.34
SNX3-203ENST00000368979 GULP1Q9UBP9 304 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 OARD1Q9Y530 152 aa23.44■■□□□ 1.34
SNX3-203ENST00000368979 STX16-NPEPL1H3BU86 382 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 STX16O14662 325 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 SEMA4FO95754 770 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 MYCLP1P12525 358 aaPredicted RBP23.43■■□□□ 1.34
SNX3-203ENST00000368979 CCR10P46092 362 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms