RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 ECI2O75521 394 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 SERPINB1P30740 379 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 AFF1P51825 1210 aaKnown RBP12.15□□□□□ -0.46
PTPRK-203ENST00000368207 GNA13Q14344 377 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 SNAP47Q5SQN1 464 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 LIX1Q8N485 282 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 KLHL3Q9UH77 587 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 WNT9AO14904 365 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 CYP4B1P13584 511 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 TYRP14679 529 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 IMPDH1P20839 514 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 SOX6P35712 828 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 HMGCS1Q01581 520 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 SLC18A2Q05940 514 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 EPS8Q12929 822 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 MPP2Q14168 576 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 SIX1Q15475 284 aaPredicted RBP12.15□□□□□ -0.46
PTPRK-203ENST00000368207 GPR33Q49SQ1 333 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 C9orf64Q5T6V5 341 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 LRRTM3Q86VH5 581 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 TTC9BQ8N6N2 239 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 CEP44Q9C0F1 390 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 CNTRLQ7Z7A1 2325 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 SLC28A2O43868 658 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 VIPP01282 170 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 USP46P62068 366 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 HERVK_113P63132 956 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 SPIBQ01892 262 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 EIF3MQ7L2H7 374 aaKnown RBP12.14□□□□□ -0.47
PTPRK-203ENST00000368207 NAT14Q8WUY8 206 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 XAGE5Q8WWM1 108 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 ERVK-6Q9BXR3 956 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 TLR9Q9NR96 1032 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 OSER1Q9NX31 292 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 CORO2BQ9UQ03 480 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 GDI1P31150 447 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 PGGT1BP53609 377 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 FAM174BQ3ZCQ3 159 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 MARCH8Q5T0T0 291 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 MED27Q6P2C8 311 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 DEF8Q6ZN54 512 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 EPHX4Q8IUS5 362 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 HDDC3Q8N4P3 179 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 DPP10Q8N608 796 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 EXOSC8Q96B26 276 aaKnown RBP12.14□□□□□ -0.47
PTPRK-203ENST00000368207 SQORQ9Y6N5 450 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.14□□□□□ -0.47
PTPRK-203ENST00000368207 FPGTO14772 594 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 DCLK1O15075 740 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 KDELR3O43731 214 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 NCK1P16333 377 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 ZNF37AP17032 561 aaPredicted RBP12.14□□□□□ -0.47
PTPRK-203ENST00000368207 IFNGR2P38484 337 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 ZNHIT3Q15649 155 aaPredicted RBP12.14□□□□□ -0.47
PTPRK-203ENST00000368207 PLD6Q8N2A8 252 aaKnown RBP12.14□□□□□ -0.47
PTPRK-203ENST00000368207 OR2T34Q8NGX1 318 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 OR2T3Q8NH03 318 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 RAD51AP1Q96B01 352 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 KIFC1Q9BW19 673 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 EPB41L4BQ9H329 900 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 CACNA1SQ13698 1873 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 RBM47A0AV96 593 aaKnown RBP12.14□□□□□ -0.47
PTPRK-203ENST00000368207 K7EPI3 171 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 OR10H3O60404 316 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 C8GP07360 202 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 ADH5P11766 374 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 GTF2E2P29084 291 aaKnown RBP12.14□□□□□ -0.47
PTPRK-203ENST00000368207 RIPK1Q13546 671 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 FAM47BQ8NA70 645 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 KLHL23Q8NBE8 558 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 MIEF2Q96C03 454 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 SLC47A1Q96FL8 570 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 RSPH9Q9H1X1 276 aaPredicted RBP12.14□□□□□ -0.47
PTPRK-203ENST00000368207 ALG2Q9H553 416 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 POLR1BQ9H9Y6 1135 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 ZDHHC2Q9UIJ5 367 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 SH3GLB1Q9Y371 365 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 ZNF780BQ9Y6R6 833 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 WASF2Q9Y6W5 498 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 NWD2Q9ULI1 1742 aa12.14□□□□□ -0.47
PTPRK-203ENST00000368207 LEFTY2O00292 366 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 DLGAP3O95886 979 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 ASLP04424 464 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 GNAZP19086 355 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 TIE1P35590 1138 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 ZNF33AQ06730 810 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 PDGFRLQ15198 375 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 MYLK3Q32MK0 819 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 ABRAXAS1Q6UWZ7 409 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 PROSER1Q86XN7 944 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 TBC1D21Q8IYX1 336 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 CAMKK1Q8N5S9 505 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 DCAF4L2Q8NA75 395 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 EEF1AKMT1Q8WVE0 214 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 PAIP1Q9H074 479 aaKnown RBP12.13□□□□□ -0.47
PTPRK-203ENST00000368207 ZDHHC3Q9NYG2 299 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 LOC100506127A0A0U1RQW1 187 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 DYTNA2CJ06 578 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 OR1F1O43749 312 aa12.13□□□□□ -0.47
PTPRK-203ENST00000368207 WFS1O76024 890 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms