RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 USP24Q9UPU5 2620 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 TSPAN11A1L157 253 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 NPIPB15A6NHN6 443 aaPredicted RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 MIF4GDA9UHW6 222 aaKnown RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 TOR1BO14657 336 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 HTRA2O43464 458 aaPredicted RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 SDC3O75056 442 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 SOCS5O75159 536 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 PGLSO95336 258 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 TNFRSF6BO95407 300 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 PRAMEF1O95521 474 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 SLC4A1P02730 911 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 MMP2P08253 660 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 CELA3BP08861 270 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 ELFN1P0C7U0 828 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 DHRS4L1P0CG22 281 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 C6P13671 934 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 ZFXP17010 805 aaPredicted RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 CTPS1P17812 591 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 HNRNPA2B1P22626 353 aaKnown RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 LHCGRP22888 699 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 RBL1P28749 1068 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 CD38P28907 300 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 CD68P34810 354 aaPredicted RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 HSPA9P38646 679 aaKnown RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 CSNK1DP48730 415 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 NR2C2P49116 596 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 CCR5P51681 352 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 ATXN3P54252 364 aaPredicted RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 RPS21P63220 83 aaKnown RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 IFI35P80217 286 aaPredicted RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 CCDC15Q0P6D6 951 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 C19orf57Q0VDD7 668 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 WASHC5Q12768 1159 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 RALGDSQ12967 914 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 IL10RAQ13651 578 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 GALNT3Q14435 633 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 NOMO1Q15155 1222 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 SLC14A2Q15849 920 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 PCSK7Q16549 785 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 SETMARQ53H47 684 aaPredicted RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 TPRG1LQ5T0D9 272 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 STPG1Q5TH74 334 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 ZNF468Q5VIY5 522 aaPredicted RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 FAM205BPQ63HN1 556 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 NAPEPLDQ6IQ20 393 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 KIAA1161Q6NSJ0 714 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 LINC00114Q6XXX2 140 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 GCNT7Q6ZNI0 430 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 PTAR1Q7Z6K3 402 aaPredicted RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 PRPF39Q86UA1 669 aaKnown RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 TSPAN33Q86UF1 283 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 HID1Q8IV36 788 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 ZNF567Q8N184 647 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 PELI3Q8N2H9 469 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 UBL4BQ8N7F7 174 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 LPCAT1Q8NF37 534 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 CEP76Q8TAP6 659 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 UBASH3BQ8TF42 649 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 TFB1MQ8WVM0 346 aaKnown RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 ATG4AQ8WYN0 398 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 RAB7BQ96AH8 199 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 ZNF641Q96N77 438 aaPredicted RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 QKIQ96PU8 341 aaKnown RBP eCLIP3.13□□□□□ -1.917e-7■■■■■ 32.6
PTPRC-203ENST00000367367 ALS2CR12Q96Q35 445 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 KLF6Q99612 283 aaPredicted RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 TLR10Q9BXR5 811 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 TDRD1Q9BXT4 1180 aaKnown RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 SLC17A9Q9BYT1 436 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 GAREM1Q9H706 876 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 CNTD2Q9H8S5 307 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 TMEM9BQ9NQ34 198 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 KLHL8Q9P2G9 620 aaPredicted RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 DKK3Q9UBP4 350 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 ACAD8Q9UKU7 415 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 PYCARDQ9ULZ3 195 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 CHKBQ9Y259 395 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 R3HDM2Q9Y2K5 976 aaKnown RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 SPO11Q9Y5K1 396 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 RAI2Q9Y5P3 530 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 SNX11Q9Y5W9 270 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 MDC1Q14676 2089 aaKnown RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 DSPP15924 2871 aaKnown RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 SMG1Q96Q15 3661 aaKnown RBP3.13□□□□□ -1.91
PTPRC-203ENST00000367367 CCDC88CQ9P219 2028 aa3.13□□□□□ -1.91
PTPRC-203ENST00000367367 A0A0J9YYE9 177 aa3.12□□□□□ -1.91
PTPRC-203ENST00000367367 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.12□□□□□ -1.91
PTPRC-203ENST00000367367 A0A1W2PR77 199 aa3.12□□□□□ -1.91
PTPRC-203ENST00000367367 PRAMEF26H0Y7S4 382 aa3.12□□□□□ -1.91
PTPRC-203ENST00000367367 H7C0C1 242 aa3.12□□□□□ -1.91
PTPRC-203ENST00000367367 K7ESM1 405 aa3.12□□□□□ -1.91
PTPRC-203ENST00000367367 SCAMP1O15126 338 aa3.12□□□□□ -1.91
PTPRC-203ENST00000367367 KCNN4O15554 427 aa3.12□□□□□ -1.91
PTPRC-203ENST00000367367 DEAF1O75398 565 aaPredicted RBP3.12□□□□□ -1.91
PTPRC-203ENST00000367367 PMPCBO75439 489 aa3.12□□□□□ -1.91
PTPRC-203ENST00000367367 TM7SF2O76062 418 aa3.12□□□□□ -1.91
PTPRC-203ENST00000367367 TJP3O95049 919 aa3.12□□□□□ -1.91
PTPRC-203ENST00000367367 CER1O95813 267 aa3.12□□□□□ -1.91
PTPRC-203ENST00000367367 PRLP01236 227 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms