RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ZNF227Q86WZ6 799 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 OR4C6Q8NH72 309 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 MKL1Q969V6 931 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 BRINP2Q9C0B6 783 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 LRRC19Q9H756 370 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 C11orf16Q9NQ32 467 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 NUDT15Q9NV35 164 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 IKZF2Q9UKS7 526 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 PLLPQ9Y342 182 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 SPATA31A6Q5VVP1 1343 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 CENPBD1B2RD01 187 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 TNFRSF11BO00300 401 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 CXCL11O14625 94 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 HTR7P34969 479 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 SLC15A1P46059 708 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 PCDH1Q08174 1060 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 RIOX2Q8IUF8 465 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 C7orf57Q8NEG2 295 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 SNX33Q8WV41 574 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 ISCA1Q9BUE6 129 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 GBA2Q9HCG7 927 aaPredicted RBP13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 HMX1Q9NP08 348 aaPredicted RBP13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 UBQLN2Q9UHD9 624 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 PLD2O14939 933 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 PEPDP12955 493 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 YBX3P16989 372 aaKnown RBP eCLIP13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 LPOP22079 712 aaPredicted RBP13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 ACSL1P33121 698 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 CDH8P55286 799 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 BTBD16Q32M84 506 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 REP15Q6BDI9 236 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 RFWD3Q6PCD5 774 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 UNC93AQ86WB7 457 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 CD300LFQ8TDQ1 290 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 LPGAT1Q92604 370 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 MRPS23Q9Y3D9 190 aaKnown RBP13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 TCRBV9S1A1TA0A576 114 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 TRAFD1O14545 582 aaPredicted RBP13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 TACSTD2P09758 323 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 CD36P16671 472 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 NRG1Q02297 640 aaPredicted RBP13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 PNPLA2Q96AD5 504 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 WASF2Q9Y6W5 498 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 CASTOR2A6NHX0 329 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 BPGMP07738 259 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 LCN1P31025 176 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 BLKP51451 505 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 BNIP3Q12983 259 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 FAM83AQ86UY5 434 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 SDR16C5Q8N3Y7 309 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 C1orf216Q8TAB5 229 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 RHBGQ9H310 441 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 CRTAC1Q9NQ79 661 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 TULP3O75386 442 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 RP2O75695 350 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 GADD45AP24522 165 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 TOR1AIP1Q5JTV8 583 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 CAPN13Q6MZZ7 669 aaPredicted RBP13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 TMEM53Q6P2H8 277 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 UNQ6126/PRO20091Q6UXV3 157 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 OR52J3Q8NH60 311 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 COQ8AQ8NI60 647 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 TRPV4Q9HBA0 871 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 PHPT1Q9NRX4 125 aaPredicted RBP13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 TAS2R3Q9NYW6 316 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 SPATA7Q9P0W8 599 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 NRCAMQ92823 1304 aa13.07□□□□□ -0.32
SRGAP3-201ENST00000360413 IPO13O94829 963 aaKnown RBP13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 IL1BP01584 269 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF782Q6ZMW2 699 aaPredicted RBP13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 GJD4Q96KN9 370 aaPredicted RBP13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 TMEM121BQ9BXQ6 578 aaPredicted RBP13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 ARHGEF4Q9NR80 690 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 CNOT6Q9ULM6 557 aaKnown RBP13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 POFUT2Q9Y2G5 429 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 JCADQ9P266 1359 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 KNTC1P50748 2209 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 KCNU1A8MYU2 1149 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 L7N2F9 121 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 SLC6A4P31645 630 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 VAMP2P63027 116 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 C1orf186Q6ZWK4 172 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 TREML1Q86YW5 311 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 OR2L2Q8NH16 312 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 ADAM32Q8TC27 787 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 SLC22A17Q8WUG5 538 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF558Q96NG5 402 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 CFL2Q9Y281 166 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 MAGEA6P43360 314 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 TAS2R50P59544 299 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 NAE1Q13564 534 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 PXMP2Q9NR77 195 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 MYPNQ86TC9 1320 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 ELOVL7A1L3X0 281 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 ANXA2P2A6NMY6 339 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 ANXA2P07355 339 aaKnown RBP13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 SPARCP09486 303 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 TMEM164Q5U3C3 297 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 ASB18Q6ZVZ8 466 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 DET1Q7L5Y6 550 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms