RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 FOXA1P55317 472 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 CREB5Q02930 508 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 CLCQ05315 142 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 BTKQ06187 659 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 LSM12Q3MHD2 195 aaKnown RBP11.77□□□□□ -0.52
SYN3-202ENST00000358763 TMEM196Q5HYL7 178 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 AGBL4Q5VU57 503 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 TMEM198Q66K66 360 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 ANKS6Q68DC2 871 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 CYHR1Q6ZMK1 362 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 PHYKPLQ8IUZ5 450 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 RAVER1Q8IY67 606 aaKnown RBP11.77□□□□□ -0.52
SYN3-202ENST00000358763 HDDC3Q8N4P3 179 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 DCBLD1Q8N8Z6 715 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 MARK4Q96L34 752 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 CCDC106Q9BWC9 280 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 MKRN2Q9H000 416 aaKnown RBP11.77□□□□□ -0.52
SYN3-202ENST00000358763 ZBTB26Q9HCK0 441 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 NUDT4Q9NZJ9 180 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 PCTPQ9UKL6 214 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 TRAF6Q9Y4K3 522 aa11.77□□□□□ -0.52
SYN3-202ENST00000358763 PRR23AA6NEV1 266 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 CAPN14A8MX76 684 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 SLCO1B7G3V0H7 640 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 TSPAN6O43657 245 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 RNASEH1O60930 286 aaKnown RBP11.77□□□□□ -0.53
SYN3-202ENST00000358763 RNASEH2AO75792 299 aaKnown RBP11.77□□□□□ -0.53
SYN3-202ENST00000358763 PCDH8O95206 1070 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 POU3F3P20264 500 aaPredicted RBP11.77□□□□□ -0.53
SYN3-202ENST00000358763 TAS2R38P59533 333 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 TMEM52BQ4KMG9 183 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 LDLRAP1Q5SW96 308 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 CYP2U1Q7Z449 544 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 SLC7A6OSQ96CW6 309 aaPredicted RBP11.77□□□□□ -0.53
SYN3-202ENST00000358763 PTCD3Q96EY7 689 aaKnown RBP11.77□□□□□ -0.53
SYN3-202ENST00000358763 LRCH3Q96II8 777 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 VPS35Q96QK1 796 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 GAS2L1Q99501 681 aaPredicted RBP11.77□□□□□ -0.53
SYN3-202ENST00000358763 EGFL8Q99944 293 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 CNOT6Q9ULM6 557 aaKnown RBP11.77□□□□□ -0.53
SYN3-202ENST00000358763 KRT87PA6NCN2 255 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 STX16-NPEPL1H3BU86 382 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 STX16O14662 325 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 RAD51BO15315 384 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 DCXO43602 365 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 S100BP04271 92 aaPredicted RBP11.77□□□□□ -0.53
SYN3-202ENST00000358763 PRDX3P30048 256 aaKnown RBP11.77□□□□□ -0.53
SYN3-202ENST00000358763 NTSR1P30989 418 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 HK2P52789 917 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 TMEM115Q12893 351 aaPredicted RBP11.77□□□□□ -0.53
SYN3-202ENST00000358763 ACAD11Q709F0 780 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 LILRA3Q8N6C8 439 aaPredicted RBP11.77□□□□□ -0.53
SYN3-202ENST00000358763 IL17RCQ8NAC3 791 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 GANCQ8TET4 914 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 PTGDR2Q9Y5Y4 395 aa11.77□□□□□ -0.53
SYN3-202ENST00000358763 MYO10Q9HD67 2058 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 IGLON5A6NGN9 336 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 SDHDO14521 159 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 NARSO43776 548 aaKnown RBP11.76□□□□□ -0.53
SYN3-202ENST00000358763 ADAM23O75077 832 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 KLF8O95600 359 aaPredicted RBP11.76□□□□□ -0.53
SYN3-202ENST00000358763 ESRRAP11474 423 aaPredicted RBP11.76□□□□□ -0.53
SYN3-202ENST00000358763 COPAP53621 1224 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 GALNT1Q10472 559 aaPredicted RBP11.76□□□□□ -0.53
SYN3-202ENST00000358763 NUMA1Q14980 2115 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 CRY1Q16526 586 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 RBBP7Q16576 425 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 ASRGL1Q7L266 308 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 SLC44A3Q8N4M1 653 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 PLA2G15Q8NCC3 412 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 DTX3LQ8TDB6 740 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 NSL1Q96IY1 281 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 OARD1Q9Y530 152 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 SNUPNO95149 360 aaKnown RBP11.76□□□□□ -0.53
SYN3-202ENST00000358763 COL9A1P20849 921 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 ARL1P40616 181 aaPredicted RBP11.76□□□□□ -0.53
SYN3-202ENST00000358763 HSPA7P48741 367 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 RPS14P62263 151 aaKnown RBP11.76□□□□□ -0.53
SYN3-202ENST00000358763 LCP2Q13094 533 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 KRT72Q14CN4 511 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 TMEM220Q6QAJ8 160 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 AFAP1L2Q8N4X5 818 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 POU5F2Q8N7G0 328 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 AGAP11Q8TF27 550 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 RAB7BQ96AH8 199 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 CATSPER2Q96P56 530 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 HGH1Q9BTY7 390 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 OR2AG1Q9H205 316 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 UBE2ZQ9H832 354 aaPredicted RBP11.76□□□□□ -0.53
SYN3-202ENST00000358763 TRPM6Q9BX84 2022 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 DOCK9Q9BZ29 2069 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 COL4A2P08572 1712 aa11.76□□□□□ -0.53
SYN3-202ENST00000358763 ATP6AP2A0A1C7CYW4 349 aa11.75□□□□□ -0.53
SYN3-202ENST00000358763 TRPC5OSA6NMA1 111 aa11.75□□□□□ -0.53
SYN3-202ENST00000358763 E2F3O00716 465 aa11.75□□□□□ -0.53
SYN3-202ENST00000358763 MBTPS2O43462 519 aa11.75□□□□□ -0.53
SYN3-202ENST00000358763 ATP6AP2O75787 350 aa11.75□□□□□ -0.53
SYN3-202ENST00000358763 ATP5HO75947 161 aa11.75□□□□□ -0.53
SYN3-202ENST00000358763 AP2A2O94973 939 aa11.75□□□□□ -0.53
SYN3-202ENST00000358763 ADH1BP00325 375 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms