RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 NXPE1Q8N323 547 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 OR52K1Q8NGK4 314 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 CXorf40BQ96DE9 158 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 SLC12A9Q9BXP2 914 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 PRSS21Q9Y6M0 314 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 SPTBP11277 2137 aa16.37■□□□□ 0.21
PDLIM7-201ENST00000355572 IGLV3-16A0A075B6K0 115 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 MGAT4DA6NG13 374 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 STK10O94804 968 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 TIAF1O95411 115 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 AP2A1O95782 977 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 DLGAP3O95886 979 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 MTHFD1P11586 935 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 AMD1P17707 334 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 CD82P27701 267 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 CETN2P41208 172 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 CCZ1BP86790 482 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 CCZ1P86791 482 aaPredicted RBP16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 SNX1Q13596 522 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 BCL7AQ4VC05 210 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 DCAF12Q5T6F0 453 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 FBXO38Q6PIJ6 1188 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 TTC13Q8NBP0 860 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 LSM14AQ8ND56 463 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 ZNF778Q96MU6 729 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 ETNK1Q9HBU6 452 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 FBXO8Q9NRD0 319 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 IMP3Q9NV31 184 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 NLE1Q9NVX2 485 aaPredicted RBP16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 CRLS1Q9UJA2 301 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 BSNQ9UPA5 3926 aa16.36■□□□□ 0.21
PDLIM7-201ENST00000355572 IGHV5-51A0A0C4DH38 117 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 GOLGA6L9A6NEM1 432 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 CRTAMO95727 393 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 POLBP06746 335 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 ZSCAN5DPP0CG00 497 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 ARCN1P48444 511 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 PRLHRP49683 370 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 SEPT6Q14141 434 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 KCNAB1Q14722 419 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 DBN1Q16643 649 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 MEI1Q5TIA1 1274 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 TMEM164Q5U3C3 297 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 IRGCQ6NXR0 463 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 SNX20Q7Z614 316 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 SERPINA9Q86WD7 417 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 PLXDC1Q8IUK5 500 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 CACNA2D3Q8IZS8 1091 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 RNF10Q8N5U6 811 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 CLDN19Q8N6F1 224 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 OR2L2Q8NH16 312 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 CDKN2AIPNLQ96HQ2 116 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 ELMO2Q96JJ3 720 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 LINC00615Q96LM1 132 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 ZCCHC2Q9C0B9 1178 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 EPB41L1Q9H4G0 881 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 ZNF768Q9H5H4 540 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 LRRC40Q9H9A6 602 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 SLC2A6Q9UGQ3 507 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 IL17BQ9UHF5 180 aa16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 DNMT3AQ9Y6K1 912 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-201ENST00000355572 FER1L5A0AVI2 2057 aa16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 EIF4E1BA6NMX2 242 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 H7C0S8 307 aa16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 STK17BO94768 372 aa16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 VCLP18206 1134 aa16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 F8A1P23610 371 aa16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 PSMA3P25788 255 aa16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 PDHA2P29803 388 aa16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 LONRF2Q1L5Z9 754 aa16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 ZRANB3Q5FWF4 1079 aa16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 CAPRIN2Q6IMN6 1127 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 PRSS42Q7Z5A4 293 aa16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 AVL9Q8NBF6 648 aa16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 KLHL6Q8WZ60 621 aa16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 C12orf66Q96MD2 445 aa16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 MAP3K3Q99759 626 aa16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 FERMT1Q9BQL6 677 aa16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 TMEM184BQ9Y519 407 aaPredicted RBP16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 MRPS18BQ9Y676 258 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-201ENST00000355572 MROH6A6NGR9 719 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 PYCARD-AS1I3L0S3 204 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 KCNJ13O60928 360 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 FOLR1P15328 257 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 ITGALP20701 1170 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 ACRV1P26436 265 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 FOXN2P32314 431 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 HALP42357 657 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 RAB15P59190 212 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 FOXM1Q08050 763 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 SEMA3AQ14563 771 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 TBR1Q16650 682 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 P3H1Q32P28 736 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 ATP1A1-AS1Q5TC04 95 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 SEL1L2Q5TEA6 688 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 CACHD1Q5VU97 1274 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 NAPRTQ6XQN6 538 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 CFAP206Q8IYR0 622 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 OR13J1Q8NGT2 312 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 WBP1Q96G27 269 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms