RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 TYW5A2RUC4 315 aaKnown RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 TARM1B6A8C7 271 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 INSIG1O15503 277 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 MGRN1O60291 552 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 SEMA7AO75326 666 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 ZMPSTE24O75844 475 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 KLHL2O95198 593 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 LUC7L3O95232 432 aaKnown RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 WISP3O95389 354 aaPredicted RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 CLDN1O95832 211 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 MYL2P10916 166 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 MBL2P11226 248 aaPredicted RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 RALBP11234 206 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 SFTPCP11686 197 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 PRF1P14222 555 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 STMN1P16949 149 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 HDCP19113 662 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 EPHA8P29322 1005 aaPredicted RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 UQCRFS1P47985 274 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 SLC1A6P48664 564 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 SGSHP51688 502 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 ZNF140P52738 457 aaPredicted RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 MPP1Q00013 466 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 IRF9Q00978 393 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 ASPHQ12797 758 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 BNIP3Q12983 259 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 DLG2Q15700 870 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 MPP7Q5T2T1 576 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 LIPMQ5VYY2 423 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 LRRC8EQ6NSJ5 796 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 CYB5D1Q6P9G0 228 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 MTDHQ86UE4 582 aaKnown RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 PACS2Q86VP3 889 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 DENND6AQ8IWF6 608 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 CENPLQ8N0S6 344 aaPredicted RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 CFAP52Q8N1V2 620 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 PLD6Q8N2A8 252 aaKnown RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 DCAF4L2Q8NA75 395 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 OR52K2Q8NGK3 314 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 PPP1R14CQ8TAE6 165 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 PPP4R1Q8TF05 950 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 SNX19Q92543 992 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 KLHL29Q96CT2 875 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 THOC1Q96FV9 657 aaKnown RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 ATXN7L3BQ96GX2 97 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 RAB3IPQ96QF0 476 aaPredicted RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 SORT1Q99523 831 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 C19orf43Q9BQ61 176 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 TDRD1Q9BXT4 1180 aaKnown RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 C20orf27Q9GZN8 174 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 CAB39LQ9H9S4 337 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 POPDC3Q9HBV1 291 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 OXSMQ9NWU1 459 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.14□□□□□ -1.11
CD44-205ENST00000352818 HEY2Q9UBP5 337 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 LSM7Q9UK45 103 aaKnown RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 RPL26L1Q9UNX3 145 aaKnown RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 SATB2Q9UPW6 733 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 ACOT9Q9Y305 439 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 ZNF106Q9H2Y7 1883 aaKnown RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 RP1L1Q8IWN7 2480 aaPredicted RBP8.14□□□□□ -1.11
CD44-205ENST00000352818 GOLGA8TH3BQL2 631 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 TRIM38O00635 465 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 HOXC11O43248 304 aaPredicted RBP8.13□□□□□ -1.11
CD44-205ENST00000352818 CCDC22O60826 627 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 TRIM13O60858 407 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 CSO75390 466 aaKnown RBP8.13□□□□□ -1.11
CD44-205ENST00000352818 WFS1O76024 890 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 CRTAMO95727 393 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 S1PR4O95977 384 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 SBK3P0C264 359 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 T-ENOLP0DO92 83 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 CALB2P22676 271 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 PTPN4P29074 926 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 SERPINB3P29508 390 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 ACSL1P33121 698 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 SERPINB5P36952 375 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 SUOXP51687 545 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 INHBCP55103 352 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 CYP4F2P78329 520 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 ELF3P78545 371 aaPredicted RBP8.13□□□□□ -1.11
CD44-205ENST00000352818 CTBP1Q13363 440 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 CYTH1Q15438 398 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 TEAD4Q15561 434 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 TAF1AQ15573 450 aaPredicted RBP8.13□□□□□ -1.11
CD44-205ENST00000352818 TGIF1Q15583 401 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 TYSND1Q2T9J0 566 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 RNF219Q5W0B1 726 aaPredicted RBP8.13□□□□□ -1.11
CD44-205ENST00000352818 FBXW10Q5XX13 1052 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 FAM45BPQ6NSW5 357 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 MRNIPQ6NTE8 343 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 ZCCHC23Q6ZST2 131 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 RAPH1Q70E73 1250 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 USP53Q70EK8 1073 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 HTR3DQ70Z44 454 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 TMEM151AQ8N4L1 468 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.13□□□□□ -1.11
CD44-205ENST00000352818 ACVR1CQ8NER5 493 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 FAM45AQ8TCE6 357 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms