RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 ZNF583Q96ND8 569 aa24.18■■□□□ 1.46
CPNE1-202ENST00000352393 ING2Q9H160 280 aa24.18■■□□□ 1.46
CPNE1-202ENST00000352393 PRG3Q9Y2Y8 225 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-202ENST00000352393 POLR3HQ9Y535 204 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-202ENST00000352393 PFDN6O15212 129 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 RSL1D1O76021 490 aaKnown RBP24.17■■□□□ 1.46
CPNE1-202ENST00000352393 DGKQP52824 942 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 C21orf59P57076 290 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 CHRNB3Q05901 458 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 KIAA0040Q15053 153 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 PCBP2Q15366 365 aaKnown RBP eCLIP24.17■■□□□ 1.465e-8■■□□□ 12.6
CPNE1-202ENST00000352393 CLLU1OSQ5K130 101 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 THAP5Q7Z6K1 395 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 STK32CQ86UX6 486 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 CLEC4FQ8N1N0 589 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 AADATQ8N5Z0 425 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 SLC22A17Q8WUG5 538 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 OR7A17O14581 309 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 PCNAP12004 261 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 ZNF182P17025 639 aaPredicted RBP24.17■■□□□ 1.46
CPNE1-202ENST00000352393 CRHBPP24387 322 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 MAP4P27816 1152 aaKnown RBP24.17■■□□□ 1.46
CPNE1-202ENST00000352393 MTHFRP42898 656 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 OR1G1P47890 313 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 MTA1Q13330 715 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 NR6A1Q15406 480 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 CTXN3Q4LDR2 81 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 GOLGA7Q7Z5G4 137 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 ZC3H7AQ8IWR0 971 aaKnown RBP24.17■■□□□ 1.46
CPNE1-202ENST00000352393 FAM86B1Q8N7N1 296 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 NUDT8Q8WV74 236 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 SCUBE2Q9NQ36 999 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 COMMD10Q9Y6G5 202 aa24.17■■□□□ 1.46
CPNE1-202ENST00000352393 H3BNC9 293 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 CYBAP13498 195 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 ZNF12P17014 697 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 OXCT1P55809 520 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 TAF1CQ15572 869 aaPredicted RBP24.16■■□□□ 1.46
CPNE1-202ENST00000352393 AURKBQ96GD4 344 aaPredicted RBP24.16■■□□□ 1.46
CPNE1-202ENST00000352393 HBEGFQ99075 208 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 TOR3AQ9H497 397 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 GORASP2Q9H8Y8 452 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 PALMDQ9NP74 551 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 HPS4Q9NQG7 708 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 KDELR3O43731 214 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 ZDHHC11BP0C7U3 371 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 NFKBIAP25963 317 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 CLCN7P51798 805 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 MAPK10P53779 464 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 TRAF2Q12933 501 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 AAK1Q2M2I8 961 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 C18orf21Q32NC0 220 aaPredicted RBP24.16■■□□□ 1.46
CPNE1-202ENST00000352393 ZRANB3Q5FWF4 1079 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 C8orf59Q8N0T1 100 aaPredicted RBP24.16■■□□□ 1.46
CPNE1-202ENST00000352393 OR4F6Q8NGB9 312 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 RAB2BQ8WUD1 216 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 HDAC2Q92769 488 aaKnown RBP24.16■■□□□ 1.46
CPNE1-202ENST00000352393 COX4I2Q96KJ9 171 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 GLT1D1Q96MS3 346 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 MBOAT4Q96T53 435 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 SPON2Q9BUD6 331 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 LHPPQ9H008 270 aa24.16■■□□□ 1.46
CPNE1-202ENST00000352393 GPN2Q9H9Y4 310 aaPredicted RBP24.16■■□□□ 1.46
CPNE1-202ENST00000352393 SYN3O14994 580 aa24.15■■□□□ 1.46
CPNE1-202ENST00000352393 TLR5O60602 858 aa24.15■■□□□ 1.46
CPNE1-202ENST00000352393 ZBTB11O95625 1053 aaPredicted RBP24.15■■□□□ 1.46
CPNE1-202ENST00000352393 ESR1P03372 595 aa24.15■■□□□ 1.46
CPNE1-202ENST00000352393 GSTM2P28161 218 aa24.15■■□□□ 1.46
CPNE1-202ENST00000352393 BMXP51813 675 aa24.15■■□□□ 1.46
CPNE1-202ENST00000352393 KPNA1P52294 538 aaPredicted RBP24.15■■□□□ 1.46
CPNE1-202ENST00000352393 NKG7Q16617 165 aa24.15■■□□□ 1.46
CPNE1-202ENST00000352393 GTF2IRD2BQ6EKJ0 949 aa24.15■■□□□ 1.46
CPNE1-202ENST00000352393 R3HCC1LQ7Z5L2 792 aaKnown RBP24.15■■□□□ 1.46
CPNE1-202ENST00000352393 GTF2IRD2Q86UP8 949 aa24.15■■□□□ 1.46
CPNE1-202ENST00000352393 TTC30BQ8N4P2 665 aa24.15■■□□□ 1.46
CPNE1-202ENST00000352393 ZNF548Q8NEK5 533 aaPredicted RBP24.15■■□□□ 1.46
CPNE1-202ENST00000352393 PJA1Q8NG27 643 aa24.15■■□□□ 1.46
CPNE1-202ENST00000352393 CRISPLD1Q9H336 500 aa24.15■■□□□ 1.46
CPNE1-202ENST00000352393 VAPAQ9P0L0 249 aa24.15■■□□□ 1.46
CPNE1-202ENST00000352393 AGO1Q9UL18 857 aaKnown RBP24.15■■□□□ 1.46
CPNE1-202ENST00000352393 NOD1Q9Y239 953 aa24.15■■□□□ 1.46
CPNE1-202ENST00000352393 SLC30A1Q9Y6M5 507 aa24.15■■□□□ 1.46
CPNE1-202ENST00000352393 ZFP37Q9Y6Q3 630 aaPredicted RBP24.15■■□□□ 1.46
CPNE1-202ENST00000352393 PLXNA4Q9HCM2 1894 aa24.15■■□□□ 1.46
CPNE1-202ENST00000352393 E5RI56 91 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 DFNA5O60443 496 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 IL7RP16871 459 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 TRAF3Q13114 568 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 SKIV2LQ15477 1246 aaKnown RBP24.14■■□□□ 1.46
CPNE1-202ENST00000352393 AP5B1Q2VPB7 878 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 SULT1C3Q6IMI6 304 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 C17orf99Q6UX52 265 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 ZDHHC13Q8IUH4 622 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 C2orf69Q8N8R5 385 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 NRBF2Q96F24 287 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 PDLIM5Q96HC4 596 aaKnown RBP24.14■■□□□ 1.46
CPNE1-202ENST00000352393 MAGED4Q96JG8 741 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 C17orf80Q9BSJ5 609 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 UGT2B28Q9BY64 529 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 P2RY12Q9H244 342 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms