RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 AP1M1Q9BXS5 423 aa15.46■□□□□ 0.07
TSPAN4-201ENST00000346501 SLC40A1Q9NP59 571 aa15.46■□□□□ 0.07
TSPAN4-201ENST00000346501 SCHIP1Q9P0W5 487 aaPredicted RBP15.46■□□□□ 0.07
TSPAN4-201ENST00000346501 ZNF624Q9P2J8 865 aaPredicted RBP15.46■□□□□ 0.07
TSPAN4-201ENST00000346501 LHX6Q9UPM6 363 aa15.46■□□□□ 0.07
TSPAN4-201ENST00000346501 TCAF1Q9Y4C2 921 aa15.46■□□□□ 0.07
TSPAN4-201ENST00000346501 PCDHB11Q9Y5F2 797 aa15.46■□□□□ 0.07
TSPAN4-201ENST00000346501 CDRT15L2A8MXV6 281 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 POLBP06746 335 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 OR56A5P0C7T3 313 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 THRAP10827 490 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 HGFP14210 728 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 HOXB3P14651 431 aaPredicted RBP15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 BRAFP15056 766 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 TPSB2P20231 275 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 CD82P27701 267 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 SLC5A2P31639 672 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 VPS41P49754 854 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 GNG11P61952 73 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 TRIP13Q15645 432 aaPredicted RBP15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 TPSAB1Q15661 275 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 RPE65Q16518 533 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 ARMC6Q6NXE6 501 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 CYB5D1Q6P9G0 228 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 FAM129CQ86XR2 697 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 GLIS1Q8NBF1 620 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 RCBTB1Q8NDN9 531 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 OR4L1Q8NH43 312 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 ZDHHC12Q96GR4 267 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 PRR11Q96HE9 360 aaPredicted RBP15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 MS4A14Q96JA4 679 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 TAAR9Q96RI9 348 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 ASPSCR1Q9BZE9 553 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 B3GNT4Q9C0J1 378 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 WWP1Q9H0M0 922 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 KCNF1Q9H3M0 494 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 SAMD15Q9P1V8 674 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 KLHL3Q9UH77 587 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 SNX12Q9UMY4 172 aa15.45■□□□□ 0.06
TSPAN4-201ENST00000346501 KMT2BQ9UMN6 2715 aaPredicted RBP15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 IGLV3-16A0A075B6K0 115 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 CCDC162PA2VCL2 907 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 PRR19A6NJB7 356 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 A8MU76 341 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 KLK10O43240 276 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 RASSF9O75901 435 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 MTHFD1P11586 935 aaKnown RBP15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 TYRP1P17643 537 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 PAMP19021 973 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 ITIH1P19827 911 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 MPSTP25325 297 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 PSMA3P25788 255 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 CSF2RBP32927 897 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 COILP38432 576 aaPredicted RBP15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 GRIA1P42261 906 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 FNTAP49354 379 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 RAB15P59190 212 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 PLOD1Q02809 727 aaPredicted RBP15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 RPA4Q13156 261 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 GPR18Q14330 331 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 CLCA4Q14CN2 919 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 C16orf72Q14CZ0 275 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 PPP1R7Q15435 360 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 DBN1Q16643 649 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 COL28A1Q2UY09 1125 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 ARMC3Q5W041 872 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 ZNF574Q6ZN55 896 aaPredicted RBP15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 TMPRSS9Q7Z410 1059 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 OTUD6BQ8N6M0 293 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 SLC39A1Q9NY26 324 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 WDR37Q9Y2I8 494 aa15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 ZNF106Q9H2Y7 1883 aaKnown RBP15.44■□□□□ 0.06
TSPAN4-201ENST00000346501 ANKRD11Q6UB99 2663 aaPredicted RBP15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 A0A1W2PNU3 283 aaPredicted RBP15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 TOX3O15405 576 aaPredicted RBP15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 PHF2O75151 1096 aa15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 GOT2P00505 430 aaKnown RBP15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 CA5AP35218 305 aa15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 ARSDP51689 593 aa15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 TMPRSS3P57727 454 aa15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 SYTL3Q4VX76 610 aa15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 DCAF12Q5T6F0 453 aa15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 CASC4Q6P4E1 433 aa15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 LRRC8BQ6P9F7 803 aa15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 PACS1Q6VY07 963 aa15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 FAM83HQ6ZRV2 1179 aaPredicted RBP15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 SPACA3Q8IXA5 215 aa15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 USP7Q93009 1102 aa15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 SGSM3Q96HU1 749 aa15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 TEFMQ96QE5 360 aaKnown RBP15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 CATSPERZQ9NTU4 200 aa15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 PDP2Q9P2J9 529 aa15.43■□□□□ 0.06
TSPAN4-201ENST00000346501 EFCAB7A8K855 629 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 B4E171 279 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 LIN7AO14910 233 aaPredicted RBP15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 CAPN5O15484 640 aaPredicted RBP15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 KDM1AO60341 852 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 FOXN2P32314 431 aa15.42■□□□□ 0.06
TSPAN4-201ENST00000346501 TSPAN7P41732 249 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms