RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 OSBPL2Q9H1P3 480 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 SPAG4Q9NPE6 437 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 GNEQ9Y223 722 aaKnown RBP10.76□□□□□ -0.69
CLCN6-202ENST00000346436 ANGPT4Q9Y264 503 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 ADAMTSL3P82987 1691 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 AKAP8O43823 692 aaKnown RBP10.76□□□□□ -0.69
CLCN6-202ENST00000346436 LILRA4P59901 499 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 RFTN2Q52LD8 501 aaPredicted RBP10.76□□□□□ -0.69
CLCN6-202ENST00000346436 CGB2Q6NT52 195 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 NIPAL1Q6NVV3 410 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 TAPT1Q6NXT6 567 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 PRMT9Q6P2P2 845 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 FAM220AQ7Z4H9 259 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 PARP8Q8N3A8 854 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 TRIB2Q92519 343 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 KLHL32Q96NJ5 620 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.76□□□□□ -0.69
CLCN6-202ENST00000346436 TTYH1Q9H313 450 aaPredicted RBP10.76□□□□□ -0.69
CLCN6-202ENST00000346436 TCRBV21S2A2A0A5A6 115 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 IQCF3P0C7M6 154 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 HGFP14210 728 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 S100GP29377 79 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 RPL5P46777 297 aaKnown RBP10.76□□□□□ -0.69
CLCN6-202ENST00000346436 LIMK2P53671 638 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 TRIM32Q13049 653 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 GPAT3Q53EU6 434 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 NCBP2-AS2Q69YL0 99 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 POTEHQ6S545 545 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 CUZD1Q86UP6 607 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 SIDT2Q8NBJ9 832 aaKnown RBP10.76□□□□□ -0.69
CLCN6-202ENST00000346436 DDHD1Q8NEL9 900 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 OR4L1Q8NH43 312 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 NSMCE2Q96MF7 247 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 OR52B2Q96RD2 323 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 PCYT2Q99447 389 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 MRPL57Q9BQC6 102 aaKnown RBP10.76□□□□□ -0.69
CLCN6-202ENST00000346436 ANKHQ9HCJ1 492 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 WDR47O94967 919 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 NDST3O95803 873 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 APOA1P02647 267 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 DLDP09622 509 aaKnown RBP10.76□□□□□ -0.69
CLCN6-202ENST00000346436 SDHBP21912 280 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 WNT3AP56704 352 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 LIN52Q52LA3 116 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 CASP12Q6UXS9 341 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 PQLC3Q8N755 202 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 FBXO30Q8TB52 745 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 AUTS2Q8WXX7 1259 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 RHOJQ9H4E5 214 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 FZD10Q9ULW2 581 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 PSMD13Q9UNM6 376 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 PLCH1Q4KWH8 1693 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 YJEFN3A6XGL0 299 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 TMEM233B4DJY2 109 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 PRMT5O14744 637 aaPredicted RBP10.76□□□□□ -0.69
CLCN6-202ENST00000346436 F2P00734 622 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 ALPPP05187 535 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 POU1F1P28069 291 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 RPS15P62841 145 aaKnown RBP10.76□□□□□ -0.69
CLCN6-202ENST00000346436 VAC14Q08AM6 782 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 C1DQ13901 141 aaKnown RBP10.76□□□□□ -0.69
CLCN6-202ENST00000346436 FAM126BQ8IXS8 530 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 KLHL6Q8WZ60 621 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 SMARCD2Q92925 531 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 DGCR6LQ9BY27 220 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 PDE7BQ9NP56 450 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 CCDC177Q9NQR7 707 aaPredicted RBP10.76□□□□□ -0.69
CLCN6-202ENST00000346436 LIMD1Q9UGP4 676 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 NENFQ9UMX5 172 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 CFL2Q9Y281 166 aa10.76□□□□□ -0.69
CLCN6-202ENST00000346436 MYH14Q7Z406 1995 aaKnown RBP10.75□□□□□ -0.69
CLCN6-202ENST00000346436 A0A1B0GW55 424 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 E9PAM4 449 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 AP2A1O95782 977 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 DUX4L2P0CJ85 424 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 DUX4L3P0CJ86 424 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 DUX4L4P0CJ87 422 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 DUX4L5P0CJ88 424 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 DUX4L6P0CJ89 424 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 DUX4L7P0CJ90 424 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 NDST2P52849 883 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 ADARP55265 1226 aaKnown RBP10.75□□□□□ -0.69
CLCN6-202ENST00000346436 CACNG1Q06432 222 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 ADRM1Q16186 407 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 IL27RAQ6UWB1 636 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 UBE2R2Q712K3 238 aaPredicted RBP10.75□□□□□ -0.69
CLCN6-202ENST00000346436 SLC7A6OSQ96CW6 309 aaPredicted RBP10.75□□□□□ -0.69
CLCN6-202ENST00000346436 PPP3R2Q96LZ3 170 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 MIPEPQ99797 713 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 GORASP1Q9BQQ3 440 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 DUX4Q9UBX2 424 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 TTC24A2A3L6 582 aaPredicted RBP10.75□□□□□ -0.69
CLCN6-202ENST00000346436 MYBPHLA2RUH7 354 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 AP3D1O14617 1153 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 LRIG2O94898 1065 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 OTCP00480 354 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 LDLRP01130 860 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 NR2F1P10589 423 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 TM4SF4P48230 202 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 SLC11A1P49279 550 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms