RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 SPATS2LQ9NUQ6 558 aaKnown RBP13.6□□□□□ -0.23
TPM4-202ENST00000344824 NLE1Q9NVX2 485 aaPredicted RBP13.6□□□□□ -0.23
TPM4-202ENST00000344824 VPS18Q9P253 973 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 CNOT6Q9ULM6 557 aaKnown RBP13.6□□□□□ -0.23
TPM4-202ENST00000344824 KCNK6Q9Y257 313 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 GLYATL1P3A0A0U1RQE8 302 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 TLDC2A0PJX2 215 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 CCDC162PA2VCL2 907 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 CXorf49A8MYA2 514 aaPredicted RBP13.59□□□□□ -0.23
TPM4-202ENST00000344824 AGRPO00253 132 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 GPR39O43194 453 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 SNX2O60749 519 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 GOT2P00505 430 aaKnown RBP13.59□□□□□ -0.23
TPM4-202ENST00000344824 RPLP0P05388 317 aaKnown RBP13.59□□□□□ -0.23
TPM4-202ENST00000344824 NUDT17P0C025 328 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 HMGCLP35914 325 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 SLCO1A2P46721 670 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 MGAT5Q09328 741 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 THOC5Q13769 683 aaKnown RBP13.59□□□□□ -0.23
TPM4-202ENST00000344824 INSCQ1MX18 579 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 PYCR3Q53H96 274 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 PDPK2PQ6A1A2 396 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 FOXR1Q6PIV2 292 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 RBM44Q6ZP01 1051 aaKnown RBP13.59□□□□□ -0.23
TPM4-202ENST00000344824 GPR156Q8NFN8 814 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 CDKN2AIPNLQ96HQ2 116 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 PLEKHG4BQ96PX9 1271 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 CCDC77Q9BR77 488 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 ACSS3Q9H6R3 686 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 MOCS1Q9NZB8 636 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 IL17CQ9P0M4 197 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 ATXN10Q9UBB4 475 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 NFKBIL1Q9UBC1 381 aaPredicted RBP13.59□□□□□ -0.23
TPM4-202ENST00000344824 PCYT1BQ9Y5K3 369 aaPredicted RBP13.59□□□□□ -0.23
TPM4-202ENST00000344824 RNF215Q9Y6U7 377 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 PIKFYVEQ9Y2I7 2098 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 FREM2Q5SZK8 3169 aa13.59□□□□□ -0.23
TPM4-202ENST00000344824 BPTFQ12830 3046 aa13.58□□□□□ -0.23
TPM4-202ENST00000344824 TRBV23OR9-2A0A075B6M9 112 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 RHPN2P1A8MT19 583 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 UGT1A9O60656 530 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 DNAJC6O75061 913 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 PRSS56P0CW18 603 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 ZNF8P17098 575 aaPredicted RBP13.58□□□□□ -0.24
TPM4-202ENST00000344824 ARNTP27540 789 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 MC4RP32245 332 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 CAMK2BQ13554 666 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 GTF2H3Q13889 308 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 KLHL38Q2WGJ6 581 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 ATP13A5Q4VNC0 1218 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 ZRANB3Q5FWF4 1079 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 C3orf38Q5JPI3 329 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 CEP85LQ5SZL2 805 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 ARMC3Q5W041 872 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 IQCKQ8N0W5 287 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 DCBLD1Q8N8Z6 715 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 CDKL2Q92772 493 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 GFM1Q96RP9 751 aaKnown RBP13.58□□□□□ -0.24
TPM4-202ENST00000344824 CYTH2Q99418 400 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 FAM96AQ9H5X1 160 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 UGT1A7Q9HAW7 530 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 UGT1A10Q9HAW8 530 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 UGT1A8Q9HAW9 530 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 ZFATQ9P243 1243 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 LRIT1Q9P2V4 623 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 RIMKLBQ9ULI2 386 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 ST14Q9Y5Y6 855 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 NFS1Q9Y697 457 aa13.58□□□□□ -0.24
TPM4-202ENST00000344824 KMT2BQ9UMN6 2715 aaPredicted RBP13.58□□□□□ -0.24
TPM4-202ENST00000344824 FAM159BA6NKW6 160 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 GRID2O43424 1007 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 NUAK1O60285 661 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 FAM155BO75949 473 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 AKT1P31749 480 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 HADHAP40939 763 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 ARCN1P48444 511 aaKnown RBP13.57□□□□□ -0.24
TPM4-202ENST00000344824 CCL7P80098 99 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 ACVR1Q04771 509 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 ZNF844Q08AG5 666 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 PEX6Q13608 980 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 LRP8Q14114 963 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 CHRNA6Q15825 494 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 KRT71Q3SY84 523 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 ZDHHC20Q5W0Z9 365 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 ZNF470Q6ECI4 717 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 AFTPHQ6ULP2 937 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 LRIG3Q6UXM1 1119 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 ADGRG6Q86SQ4 1221 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 LDB1Q86U70 411 aaPredicted RBP13.57□□□□□ -0.24
TPM4-202ENST00000344824 TRAPPC5Q8IUR0 188 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 OR6C4Q8NGE1 309 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 PAFAH2Q99487 392 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 CENPHQ9H3R5 247 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 ATXN7L1Q9ULK2 861 aaPredicted RBP13.57□□□□□ -0.24
TPM4-202ENST00000344824 DNAJC16Q9Y2G8 782 aa13.57□□□□□ -0.24
TPM4-202ENST00000344824 MAP2K7O14733 419 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 RASGRF2O14827 1237 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 CDK14O94921 469 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 PRAMEF1O95521 474 aa13.56□□□□□ -0.24
TPM4-202ENST00000344824 C1QAP02745 245 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms