RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 C3orf30Q96M34 536 aa15.18■□□□□ 0.02
LIMK2-203ENST00000340552 MKRN2Q9H000 416 aaKnown RBP15.18■□□□□ 0.02
LIMK2-203ENST00000340552 ALG2Q9H553 416 aa15.18■□□□□ 0.02
LIMK2-203ENST00000340552 SEPT10Q9P0V9 454 aa15.18■□□□□ 0.02
LIMK2-203ENST00000340552 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.18■□□□□ 0.02
LIMK2-203ENST00000340552 INTS6Q9UL03 887 aaKnown RBP15.18■□□□□ 0.02
LIMK2-203ENST00000340552 NDUFAF1Q9Y375 327 aa15.18■□□□□ 0.02
LIMK2-203ENST00000340552 NAT2P11245 290 aa15.18■□□□□ 0.02
LIMK2-203ENST00000340552 ENPP1P22413 925 aa15.18■□□□□ 0.02
LIMK2-203ENST00000340552 CD6P30203 668 aa15.18■□□□□ 0.02
LIMK2-203ENST00000340552 NR2C2P49116 596 aa15.18■□□□□ 0.02
LIMK2-203ENST00000340552 SCNN1GP51170 649 aa15.18■□□□□ 0.02
LIMK2-203ENST00000340552 YIF1BQ5BJH7 314 aa15.18■□□□□ 0.02
LIMK2-203ENST00000340552 ZNF438Q7Z4V0 828 aa15.18■□□□□ 0.02
LIMK2-203ENST00000340552 PLD3Q8IV08 490 aa15.18■□□□□ 0.02
LIMK2-203ENST00000340552 UBQLNLQ8IYU4 475 aa15.18■□□□□ 0.02
LIMK2-203ENST00000340552 B3GALNT2Q8NCR0 500 aa15.18■□□□□ 0.02
LIMK2-203ENST00000340552 DNAJB14Q8TBM8 379 aa15.18■□□□□ 0.02
LIMK2-203ENST00000340552 RAET1EQ8TD07 263 aa15.18■□□□□ 0.02
LIMK2-203ENST00000340552 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.18■□□□□ 0.024e-6■■■■■ 41.2
LIMK2-203ENST00000340552 AURKBQ96GD4 344 aaPredicted RBP15.18■□□□□ 0.02
LIMK2-203ENST00000340552 CCDC154A6NI56 674 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 ANGPT2O15123 496 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 MDM4O15151 490 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 TBC1D4O60343 1298 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 UMPSP11172 480 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 ALOX12P18054 663 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 POLR2CP19387 275 aaPredicted RBP15.17■□□□□ 0.02
LIMK2-203ENST00000340552 KCNA5P22460 613 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 GGT5P36269 586 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 HTR2BP41595 481 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 ACLYP53396 1101 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 FCHO2Q0JRZ9 810 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 ACOX1Q15067 660 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 PTRH1Q86Y79 214 aaKnown RBP15.17■□□□□ 0.02
LIMK2-203ENST00000340552 CEP97Q8IW35 865 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 RIMKLAQ8IXN7 391 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 FAM109AQ8N4B1 249 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 KHSRPQ92945 711 aaKnown RBP eCLIP15.17■□□□□ 0.02
LIMK2-203ENST00000340552 SENP8Q96LD8 212 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 ATP13A2Q9NQ11 1180 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 RPRD1BQ9NQG5 326 aaKnown RBP15.17■□□□□ 0.02
LIMK2-203ENST00000340552 ERVK-18Q9QC07 812 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 GIMAP2Q9UG22 337 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 C12orf71A8MTZ7 269 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 HAT1O14929 419 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 NOBOXO60393 691 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 PCNAP12004 261 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 ATP4BP51164 291 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 ATXN1P54253 815 aaKnown RBP15.17■□□□□ 0.02
LIMK2-203ENST00000340552 ISL1P61371 349 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 LIPEQ05469 1076 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 HSPA14Q0VDF9 509 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 TUBA3EQ6PEY2 450 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 MRPL10Q7Z7H8 261 aaKnown RBP15.17■□□□□ 0.02
LIMK2-203ENST00000340552 ZDHHC17Q8IUH5 632 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 TTC9Q92623 222 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 P2RY11Q96G91 374 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 RNF170Q96K19 258 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 TBCBQ99426 244 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 VANGL2Q9ULK5 521 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 ACOT9Q9Y305 439 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 PCDHGB1Q9Y5G3 927 aa15.17■□□□□ 0.02
LIMK2-203ENST00000340552 NAGAP17050 411 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 HRH2P25021 359 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 SDC4P31431 198 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 TOP3AQ13472 1001 aaPredicted RBP15.16■□□□□ 0.02
LIMK2-203ENST00000340552 SUZ12Q15022 739 aaKnown RBP15.16■□□□□ 0.02
LIMK2-203ENST00000340552 ZNF404Q494X3 552 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 CERCAMQ5T4B2 595 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 IDO2Q6ZQW0 420 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 PRR23CQ6ZRP0 262 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 CCDC185Q8N715 623 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 KIAA1958Q8N8K9 716 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 CLEC4CQ8WTT0 213 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 CSPG4P5Q96PW8 444 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 REXO4Q9GZR2 422 aaKnown RBP15.16■□□□□ 0.02
LIMK2-203ENST00000340552 NARFLQ9H6Q4 476 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 C12orf4Q9NQ89 552 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 CREBZFQ9NS37 354 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 DNMT3LQ9UJW3 386 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 ZNF623O75123 536 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 SEMA3DO95025 777 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 LCP1P13796 627 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 PSMB9P28065 219 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 DDOSTP39656 456 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 KCNAB2Q13303 367 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 HS3ST5Q8IZT8 346 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 ZNF567Q8N184 647 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 PARP16Q8N5Y8 322 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 CNIH3Q8TBE1 160 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 MCOLN3Q8TDD5 553 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 ZHX1-C8orf76Q96EF9 292 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 ASB2Q96Q27 587 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 CFHR5Q9BXR6 569 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 C6orf62Q9GZU0 229 aaPredicted RBP15.16■□□□□ 0.02
LIMK2-203ENST00000340552 PIF1Q9H611 641 aa15.16■□□□□ 0.02
LIMK2-203ENST00000340552 CASTOR2A6NHX0 329 aa15.15■□□□□ 0.02
LIMK2-203ENST00000340552 DPYSL4O14531 572 aa15.15■□□□□ 0.02
LIMK2-203ENST00000340552 GABRDO14764 452 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms