RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 KRTCAP2Q8N6L1 136 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 OR2T12Q8NG77 320 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 OR4F6Q8NGB9 312 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 DUS3LQ96G46 650 aaKnown RBP14.21□□□□□ -0.14
CPSF7-201ENST00000340437 NSMCE3Q96MG7 304 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 PRDM5Q9NQX1 630 aaPredicted RBP14.21□□□□□ -0.14
CPSF7-201ENST00000340437 GKN1Q9NS71 199 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 HCSTQ9UBK5 93 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 VPS4AQ9UN37 437 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 SNX5Q9Y5X3 404 aa14.21□□□□□ -0.14
CPSF7-201ENST00000340437 TCRBV5S2A0A599 114 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 UPK3BL1B0FP48 263 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 CFAP99D6REC4 459 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 UPK3BL2E5RIL1 263 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 SEC22BO75396 215 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 MATN4O95460 622 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 S100BP04271 92 aaPredicted RBP14.2□□□□□ -0.14
CPSF7-201ENST00000340437 TACR2P21452 398 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 FSHRP23945 695 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 OXCT1P55809 520 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 CARTPTQ16568 116 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 GLB1LQ6UWU2 654 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 GALNT10Q86SR1 603 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 CGREF1Q99674 301 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 MYOCQ99972 504 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 NSUN3Q9H649 340 aaKnown RBP14.2□□□□□ -0.14
CPSF7-201ENST00000340437 IPPKQ9H8X2 491 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 FAIMQ9NVQ4 179 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 VAPAQ9P0L0 249 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 UBA2Q9UBT2 640 aaPredicted RBP14.2□□□□□ -0.14
CPSF7-201ENST00000340437 PCDHGA11Q9Y5H2 935 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 PRKD3O94806 890 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 FPGSQ05932 587 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 SETMARQ53H47 684 aaPredicted RBP14.2□□□□□ -0.14
CPSF7-201ENST00000340437 COX4I2Q96KJ9 171 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 SUSD3Q96L08 255 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 GPR63Q9BZJ6 419 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 TM6SF2Q9BZW4 377 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 FBXO44Q9H4M3 255 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 LATS2Q9NRM7 1088 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 COMMD8Q9NX08 183 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 PKP3Q9Y446 797 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 PCDHB5Q9Y5E4 795 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 PCDHGA8Q9Y5G5 932 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 LCHNA4D1U4 455 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 ZNF682O95780 498 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 B3GALT4O96024 378 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 FAM163BP0C2L3 166 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 BMP1P13497 986 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 EFNA1P20827 205 aaPredicted RBP14.2□□□□□ -0.14
CPSF7-201ENST00000340437 NFKB2Q00653 900 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 DAG1Q14118 895 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 CRTC3Q6UUV7 619 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 FAM151BQ6UXP7 276 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 THAP5Q7Z6K1 395 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 RNF168Q8IYW5 571 aaPredicted RBP14.2□□□□□ -0.14
CPSF7-201ENST00000340437 SLC22A15Q8IZD6 547 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 ACDQ96AP0 544 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 DERL2Q9GZP9 239 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 CARS2Q9HA77 564 aaKnown RBP14.2□□□□□ -0.14
CPSF7-201ENST00000340437 CD320Q9NPF0 282 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 PNMA8BQ9ULN7 279 aaPredicted RBP14.2□□□□□ -0.14
CPSF7-201ENST00000340437 MED16Q9Y2X0 877 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 PCDHB9Q9Y5E1 797 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 GMEB1Q9Y692 573 aa14.2□□□□□ -0.14
CPSF7-201ENST00000340437 A0A1W2PQ67 120 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 ZSCAN9O15535 394 aaPredicted RBP14.19□□□□□ -0.14
CPSF7-201ENST00000340437 EEDO75530 441 aaKnown RBP14.19□□□□□ -0.14
CPSF7-201ENST00000340437 MLYCDO95822 493 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 FTH1P02794 183 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 ALPIP09923 528 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 PIGAP37287 484 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 CD300CQ08708 224 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 EIF4EBP2Q13542 120 aaPredicted RBP14.19□□□□□ -0.14
CPSF7-201ENST00000340437 CYP2A13Q16696 494 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 BTLAQ7Z6A9 289 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 RHEBL1Q8TAI7 183 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 CNIH3Q8TBE1 160 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 ULK4Q96C45 1275 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 SLC39A13Q96H72 371 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 C1orf74Q96LT6 269 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 ZBTB18Q99592 522 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 TUBA8Q9NY65 449 aaPredicted RBP14.19□□□□□ -0.14
CPSF7-201ENST00000340437 PTBP2Q9UKA9 531 aaKnown RBP14.19□□□□□ -0.14
CPSF7-201ENST00000340437 BAG5Q9UL15 447 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 SH3GLB1Q9Y371 365 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 PCDHB3Q9Y5E6 796 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 RAI2Q9Y5P3 530 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 MIA3Q5JRA6 1907 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 TSC2P49815 1807 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 A0A0U1RQF3 1178 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 FAM234BA2RU67 622 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 VPS4BO75351 444 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 MYCLP1P12525 358 aaPredicted RBP14.19□□□□□ -0.14
CPSF7-201ENST00000340437 SLC26A3P40879 764 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 MAPKAPK3Q16644 382 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 TRIM16LQ309B1 348 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 VARS2Q5ST30 1063 aaKnown RBP14.19□□□□□ -0.14
CPSF7-201ENST00000340437 NADSYN1Q6IA69 706 aa14.19□□□□□ -0.14
CPSF7-201ENST00000340437 MBOAT1Q6ZNC8 495 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms