RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CLIP4Q8N3C7 705 aa13.97□□□□□ -0.17
PCDH8-201ENST00000338862 RAB2BQ8WUD1 216 aa13.97□□□□□ -0.17
PCDH8-201ENST00000338862 PYCR2Q96C36 320 aa13.97□□□□□ -0.17
PCDH8-201ENST00000338862 ZFYVE19Q96K21 471 aa13.97□□□□□ -0.17
PCDH8-201ENST00000338862 CGREF1Q99674 301 aa13.97□□□□□ -0.17
PCDH8-201ENST00000338862 ERVK-18Q9QC07 812 aa13.97□□□□□ -0.17
PCDH8-201ENST00000338862 ANKRD31Q8N7Z5 1873 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 KRBA1A5PL33 1030 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 TFECO14948 347 aaPredicted RBP13.96□□□□□ -0.17
PCDH8-201ENST00000338862 BCAS1O75363 584 aaPredicted RBP13.96□□□□□ -0.17
PCDH8-201ENST00000338862 RPP40O75818 363 aaKnown RBP13.96□□□□□ -0.17
PCDH8-201ENST00000338862 SCNN1AP37088 669 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 CD47Q08722 323 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 TRIM32Q13049 653 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 MAPRE1Q15691 268 aaKnown RBP13.96□□□□□ -0.17
PCDH8-201ENST00000338862 DGUOKQ16854 277 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 UGT3A2Q3SY77 523 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 CACHD1Q5VU97 1274 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 SPPL2AQ8TCT8 520 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 IGSF8Q969P0 613 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 NSUN3Q9H649 340 aaKnown RBP13.96□□□□□ -0.17
PCDH8-201ENST00000338862 ARMC1Q9NVT9 282 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 C3orf18Q9UK00 162 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 PNMA8CA0A1B0GUJ8 204 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 ST13P50502 369 aaKnown RBP13.96□□□□□ -0.17
PCDH8-201ENST00000338862 CRY1Q16526 586 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 SMN1Q16637 294 aaKnown RBP13.96□□□□□ -0.17
PCDH8-201ENST00000338862 ZNF549Q6P9A3 640 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 DSG4Q86SJ6 1040 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 HID1Q8IV36 788 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 TTC9BQ8N6N2 239 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 MCFD2Q8NI22 146 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 NDNFQ8TB73 568 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 RPL3LQ92901 407 aaKnown RBP13.96□□□□□ -0.17
PCDH8-201ENST00000338862 MAELQ96JY0 434 aaKnown RBP13.96□□□□□ -0.17
PCDH8-201ENST00000338862 SMAD5Q99717 465 aaKnown RBP13.96□□□□□ -0.17
PCDH8-201ENST00000338862 TPK1Q9H3S4 243 aa13.96□□□□□ -0.17
PCDH8-201ENST00000338862 F5H5T6 163 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 KRT8P05787 483 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 S100A5P33763 92 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 ACADVLP49748 655 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 ZNF846Q147U1 533 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 RFTN2Q52LD8 501 aaPredicted RBP13.95□□□□□ -0.18
PCDH8-201ENST00000338862 PDCD4Q53EL6 469 aaKnown RBP13.95□□□□□ -0.18
PCDH8-201ENST00000338862 GPR153Q6NV75 609 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 PLEKHH3Q7Z736 793 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 LIX1Q8N485 282 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 TERB1Q8NA31 727 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 NPLOC4Q8TAT6 608 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 ISL2Q96A47 359 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 YIPF2Q9BWQ6 316 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 ZNF385DQ9H6B1 395 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 CD320Q9NPF0 282 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 FARSBQ9NSD9 589 aaKnown RBP13.95□□□□□ -0.18
PCDH8-201ENST00000338862 ASB1Q9Y576 335 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 KRT75O95678 551 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 AZGP1P25311 298 aaKnown RBP13.95□□□□□ -0.18
PCDH8-201ENST00000338862 PIGAP37287 484 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 HLCSP50747 726 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 KCNQ1P51787 676 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 AIF1P55008 147 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 OXCT1P55809 520 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 TAF10Q12962 218 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 PIK3R6Q5UE93 754 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 HS6ST3Q8IZP7 471 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 TMEM86AQ8N2M4 240 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 ZUFSPQ96AP4 578 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 IL12RB2Q99665 862 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 EBPLQ9BY08 206 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 TRIM54Q9BYV2 358 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 CLPBQ9H078 707 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 TREX1Q9NSU2 369 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 OLA1Q9NTK5 396 aaKnown RBP13.95□□□□□ -0.18
PCDH8-201ENST00000338862 PTCH2Q9Y6C5 1203 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 KNL1Q8NG31 2342 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 FXYD1O00168 92 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 ULK1O75385 1050 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 IGFBP5P24593 272 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 GTF2E2P29084 291 aaKnown RBP13.95□□□□□ -0.18
PCDH8-201ENST00000338862 HCAR3P49019 387 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 MLLT6P55198 1093 aaPredicted RBP13.95□□□□□ -0.18
PCDH8-201ENST00000338862 CDC42EP1Q00587 391 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 NPTX1Q15818 432 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 UAP1L1Q3KQV9 507 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 CTXN3Q4LDR2 81 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 C6orf141Q5SZD1 244 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 INTS11Q5TA45 600 aaKnown RBP13.95□□□□□ -0.18
PCDH8-201ENST00000338862 MBOAT1Q6ZNC8 495 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 DENND1CQ8IV53 801 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 ADHFE1Q8IWW8 467 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 REXO5Q96IC2 774 aaKnown RBP13.95□□□□□ -0.18
PCDH8-201ENST00000338862 MAGEL2Q9UJ55 1249 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 CRLS1Q9UJA2 301 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 SAMHD1Q9Y3Z3 626 aaKnown RBP13.95□□□□□ -0.18
PCDH8-201ENST00000338862 OAS3Q9Y6K5 1087 aaKnown RBP13.95□□□□□ -0.18
PCDH8-201ENST00000338862 UBR3Q6ZT12 1888 aa13.95□□□□□ -0.18
PCDH8-201ENST00000338862 ELOVL7A1L3X0 281 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 RAP2AP10114 183 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 MBL2P11226 248 aaPredicted RBP13.94□□□□□ -0.18
PCDH8-201ENST00000338862 PKMP14618 531 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms