RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 SAGE1Q9NXZ1 904 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ACTR10Q9NZ32 417 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ADGRE2Q9UHX3 823 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 DAGLAQ9Y4D2 1042 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 CSDE1O75534 798 aaKnown RBP10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 CFL1P23528 166 aaKnown RBP10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 CDH13P55290 713 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 RGCCQ9H4X1 137 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 ARL15Q9NXU5 204 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 IKZF2Q9UKS7 526 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 FKBP7Q9Y680 259 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 PLATP00750 562 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 MBL2P11226 248 aaPredicted RBP10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 S100A10P60903 97 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 PCDH1Q08174 1060 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 SELPLGQ14242 412 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 DET1Q7L5Y6 550 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 SYVN1Q86TM6 617 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 CAND1Q86VP6 1230 aaKnown RBP10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 EFCAB3Q8N7B9 438 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 FN3KQ9H479 309 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 PTPRJQ12913 1337 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 ANKRD31Q8N7Z5 1873 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 SNAPINO95295 136 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 ALG10Q5BKT4 473 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 LRRN1Q6UXK5 716 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 ZNF730Q6ZMV8 503 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 SMURF1Q9HCE7 757 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 CMAHPQ9Y471 501 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 SULT1C2O00338 296 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 CSH1P0DML2 217 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 CSH2P0DML3 217 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 UQCRC1P31930 480 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 IGFALSP35858 605 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 SCGB2A2Q13296 93 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 SNTA1Q13424 505 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 AUTS2Q8WXX7 1259 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 PURBQ96QR8 312 aaKnown RBP10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 XRCC1P18887 633 aaPredicted RBP10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 RHOAP61586 193 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 KLF10Q13118 480 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 RAP1GAP2Q684P5 730 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 DOK6Q6PKX4 331 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 CHPT1Q8WUD6 406 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 SLC44A1Q8WWI5 657 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 PSKH2Q96QS6 385 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 ZNF436Q9C0F3 470 aaPredicted RBP10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 KLQ9UEF7 1012 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 GH1P01241 217 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 ALDH7A1P49419 539 aaKnown RBP10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 PRKCDQ05655 676 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 FOXM1Q08050 763 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 BMT2Q1RMZ1 405 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 RFWD3Q6PCD5 774 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 ZNF782Q6ZMW2 699 aaPredicted RBP10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 USP51Q70EK9 711 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 SLC7A8Q9UHI5 535 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 TRPV2Q9Y5S1 764 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 IFT172Q9UG01 1749 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 HSBP1L1C9JCN9 74 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 SGCEO43556 437 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 SERPINB7O75635 380 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 SAGP10523 405 aaPredicted RBP10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 CYP2F1P24903 491 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 SLC13A2Q13183 592 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 DPYSL3Q14195 570 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 EPHA7Q15375 998 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 MCOLN2Q8IZK6 566 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 SELENOMQ8WWX9 145 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 KLHL6Q8WZ60 621 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 PPP4R1LQ9P1A2 415 aa10.23□□□□□ -0.77
SPTBN1-201ENST00000333896 E2F3O00716 465 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 APOC3P02656 99 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 CRY1Q16526 586 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 AKR1C8PQ5T2L2 129 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 CES3Q6UWW8 571 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 SSX9Q7RTT3 188 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 FBXO33Q7Z6M2 555 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 GHDCQ8N2G8 530 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 SOHLH2Q9NX45 425 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 ANKMY1Q9P2S6 941 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 HECW2Q9P2P5 1572 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 N4BP2Q86UW6 1770 aaPredicted RBP10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 CCNB2O95067 398 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 SCELO95171 688 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 LTA4HP09960 611 aaKnown RBP10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 MGAT1P26572 445 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 HUNKP57058 714 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 GCNT1Q02742 428 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 SETMARQ53H47 684 aaPredicted RBP10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 CPSF7Q8N684 471 aaKnown RBP10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 OR2T12Q8NG77 320 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 OR10H5Q8NGA6 315 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 PARPBPQ9NWS1 579 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 EGFL7Q9UHF1 273 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 KLF11O14901 512 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 PAHP00439 452 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 ZNF470Q6ECI4 717 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 NOTUMQ6P988 496 aa10.22□□□□□ -0.77
SPTBN1-201ENST00000333896 CORO6Q6QEF8 472 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms