RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 E7ESA3 106 aa17.46■□□□□ 0.39
CCS-201ENST00000310190 LIN7AO14910 233 aaPredicted RBP17.46■□□□□ 0.39
CCS-201ENST00000310190 FTH1P02794 183 aa17.46■□□□□ 0.39
CCS-201ENST00000310190 OR56A5P0C7T3 313 aa17.46■□□□□ 0.39
CCS-201ENST00000310190 JUPP14923 745 aa17.46■□□□□ 0.39
CCS-201ENST00000310190 CD1CP29017 333 aa17.46■□□□□ 0.39
CCS-201ENST00000310190 CCL7P80098 99 aa17.46■□□□□ 0.39
CCS-201ENST00000310190 ZFP36L1Q07352 338 aaKnown RBP17.46■□□□□ 0.39
CCS-201ENST00000310190 SEMA3AQ14563 771 aa17.46■□□□□ 0.39
CCS-201ENST00000310190 ISXQ2M1V0 245 aa17.46■□□□□ 0.39
CCS-201ENST00000310190 DNAJC21Q5F1R6 531 aaKnown RBP17.46■□□□□ 0.39
CCS-201ENST00000310190 RNF187Q5TA31 235 aaPredicted RBP17.46■□□□□ 0.39
CCS-201ENST00000310190 MRNIPQ6NTE8 343 aa17.46■□□□□ 0.39
CCS-201ENST00000310190 FAM83HQ6ZRV2 1179 aaPredicted RBP17.46■□□□□ 0.39
CCS-201ENST00000310190 SEC14L1Q92503 715 aa17.46■□□□□ 0.39
CCS-201ENST00000310190 FCRL3Q96P31 734 aaPredicted RBP17.46■□□□□ 0.39
CCS-201ENST00000310190 GFM1Q96RP9 751 aaKnown RBP17.46■□□□□ 0.39
CCS-201ENST00000310190 EBNA1BP2Q99848 306 aaKnown RBP17.46■□□□□ 0.39
CCS-201ENST00000310190 MARCH4Q9P2E8 410 aaPredicted RBP17.46■□□□□ 0.39
CCS-201ENST00000310190 ANAPC5Q9UJX4 755 aa17.46■□□□□ 0.39
CCS-201ENST00000310190 VPS9D1Q9Y2B5 631 aa17.46■□□□□ 0.39
CCS-201ENST00000310190 USP24Q9UPU5 2620 aa17.46■□□□□ 0.39
CCS-201ENST00000310190 ZZEF1O43149 2961 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 CCDC78A2IDD5 438 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 TMEM8BA6NDV4 472 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 EFCAB8A8MWE9 144 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 BHMG1C9JSJ3 638 aaPredicted RBP17.45■□□□□ 0.38
CCS-201ENST00000310190 PRMT5O14744 637 aaPredicted RBP17.45■□□□□ 0.38
CCS-201ENST00000310190 VAPBO95292 243 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 CPNE6O95741 557 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 POLBP06746 335 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 PGAM1P18669 254 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 HALP42357 657 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 MLLT3P42568 568 aaPredicted RBP17.45■□□□□ 0.38
CCS-201ENST00000310190 PDX1P52945 283 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 TARDBPQ13148 414 aaKnown RBP eCLIP17.45■□□□□ 0.383e-6■■■■□ 26.3
CCS-201ENST00000310190 SPIDRQ14159 915 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 NFE2L1Q14494 772 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 CLCA4Q14CN2 919 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 KCTD19Q17RG1 926 aaPredicted RBP17.45■□□□□ 0.38
CCS-201ENST00000310190 WDR74Q6RFH5 385 aaPredicted RBP17.45■□□□□ 0.38
CCS-201ENST00000310190 TMEM26Q6ZUK4 368 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 SLITRK4Q8IW52 837 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 PDIK1LQ8N165 341 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 CLDN19Q8N6F1 224 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 STAMBPL1Q96FJ0 436 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 LIN37Q96GY3 246 aaPredicted RBP17.45■□□□□ 0.38
CCS-201ENST00000310190 TRIM51Q9BSJ1 452 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 RAB33BQ9H082 229 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 OR52A5Q9H2C5 316 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 OSGEPL1Q9H4B0 414 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 LATS2Q9NRM7 1088 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 DNAJC16Q9Y2G8 782 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 WDR37Q9Y2I8 494 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 MRFAP1Q9Y605 127 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 RPS6KL1Q9Y6S9 549 aa17.45■□□□□ 0.38
CCS-201ENST00000310190 SLC5A10A0PJK1 596 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 GOLGA8MH3BSY2 632 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 PFDN6O15212 129 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 RAD51CO43502 376 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 DXOO77932 396 aaKnown RBP17.44■□□□□ 0.38
CCS-201ENST00000310190 RPLP0P05388 317 aaKnown RBP17.44■□□□□ 0.38
CCS-201ENST00000310190 NDUFS1P28331 727 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 RPL21P46778 160 aaKnown RBP17.44■□□□□ 0.38
CCS-201ENST00000310190 ITGA8P53708 1063 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 EIF3IQ13347 325 aaKnown RBP17.44■□□□□ 0.38
CCS-201ENST00000310190 TRA2AQ13595 282 aaKnown RBP eCLIP17.44■□□□□ 0.38
CCS-201ENST00000310190 RPE65Q16518 533 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 PLA2G4EQ3MJ16 856 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 MSS51Q4VC12 460 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 STEAP4Q687X5 459 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 NEPROQ6NW34 567 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 DET1Q7L5Y6 550 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 GALNT7Q86SF2 657 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 SDCCAG8Q86SQ7 713 aaPredicted RBP17.44■□□□□ 0.38
CCS-201ENST00000310190 CILP2Q8IUL8 1156 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 CALML6Q8TD86 181 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 LPGAT1Q92604 370 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 TMEM159Q96B96 161 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 TMEM74Q96NL1 305 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 COG4Q9H9E3 785 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 INTS10Q9NVR2 710 aaKnown RBP17.44■□□□□ 0.38
CCS-201ENST00000310190 ENTPD2Q9Y5L3 495 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 HEBP2Q9Y5Z4 205 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 TEX264Q9Y6I9 313 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 PRSS21Q9Y6M0 314 aa17.44■□□□□ 0.38
CCS-201ENST00000310190 WDFY3Q8IZQ1 3526 aa17.43■□□□□ 0.38
CCS-201ENST00000310190 PDZK1P1A8MUH7 402 aa17.43■□□□□ 0.38
CCS-201ENST00000310190 H3BMM5 538 aa17.43■□□□□ 0.38
CCS-201ENST00000310190 OR1I1O60431 355 aa17.43■□□□□ 0.38
CCS-201ENST00000310190 SNX2O60749 519 aa17.43■□□□□ 0.38
CCS-201ENST00000310190 GPC4O75487 556 aa17.43■□□□□ 0.38
CCS-201ENST00000310190 RPL10P27635 214 aaKnown RBP17.43■□□□□ 0.38
CCS-201ENST00000310190 CAV1Q03135 178 aa17.43■□□□□ 0.38
CCS-201ENST00000310190 DHX9Q08211 1270 aaKnown RBP17.43■□□□□ 0.38
CCS-201ENST00000310190 HIF1AQ16665 826 aa17.43■□□□□ 0.38
CCS-201ENST00000310190 LONRF1Q17RB8 773 aa17.43■□□□□ 0.38
CCS-201ENST00000310190 KIF26BQ2KJY2 2108 aa17.43■□□□□ 0.38
CCS-201ENST00000310190 CASC4Q6P4E1 433 aa17.43■□□□□ 0.38
CCS-201ENST00000310190 CNTN4Q8IWV2 1026 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms