RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CREB1P16220 341 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 OLR1P78380 273 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 SNX20Q7Z614 316 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 C11orf65Q8NCR3 313 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 A0A0U1RQF3 1178 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 SNPHO15079 494 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 F2P00734 622 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 CSKP41240 450 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 NDUFA9Q16795 377 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 PRR23CQ6ZRP0 262 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 BRINP2Q9C0B6 783 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 PLGRKTQ9HBL7 147 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 SRRDQ9UH36 339 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 CIDEBQ9UHD4 219 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 SCN2BO60939 215 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 TULP3O75386 442 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 HLA-DQB2P05538 268 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 UBR7Q8N806 425 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 EXOSC8Q96B26 276 aaKnown RBP15.75■□□□□ 0.11
USP42-201ENST00000306177 DENND2DQ9H6A0 471 aaPredicted RBP15.75■□□□□ 0.11
USP42-201ENST00000306177 CMTM6Q9NX76 183 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 GNEQ9Y223 722 aaKnown RBP15.75■□□□□ 0.11
USP42-201ENST00000306177 MAP4K5Q9Y4K4 846 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 ARVCFO00192 962 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 SLC22A2O15244 555 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 KCNE1P15382 129 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 PSMD4P55036 377 aaKnown RBP15.74■□□□□ 0.11
USP42-201ENST00000306177 SLC5A9Q2M3M2 681 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 FAM98AQ8NCA5 519 aaKnown RBP15.74■□□□□ 0.11
USP42-201ENST00000306177 B3GALT6Q96L58 329 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 GDAP2Q9NXN4 497 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 CNOT6Q9ULM6 557 aaKnown RBP15.74■□□□□ 0.11
USP42-201ENST00000306177 C9IYK1 514 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 TBX18O95935 607 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 UGT1A5P35504 534 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 GJA9P57773 515 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 ILF3Q12906 894 aaKnown RBP eCLIP15.74■□□□□ 0.11
USP42-201ENST00000306177 IKBIPQ70UQ0 350 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 THAP5Q7Z6K1 395 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 PIGWQ7Z7B1 504 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 C1orf109Q9NX04 203 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 NFKBIL1Q9UBC1 381 aaPredicted RBP15.74■□□□□ 0.11
USP42-201ENST00000306177 MRPS7Q9Y2R9 242 aaKnown RBP15.74■□□□□ 0.11
USP42-201ENST00000306177 ABHD14A-ACY1A0A1B0GW23 586 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 CCDC162PA2VCL2 907 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 ABLIM1O14639 778 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 UGT1A9O60656 530 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 RASGRP1O95267 797 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 TRAP1Q12931 704 aaKnown RBP15.74■□□□□ 0.11
USP42-201ENST00000306177 LARS2Q15031 903 aaKnown RBP15.74■□□□□ 0.11
USP42-201ENST00000306177 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.74■□□□□ 0.11
USP42-201ENST00000306177 GLB1L3Q8NCI6 653 aaPredicted RBP15.74■□□□□ 0.11
USP42-201ENST00000306177 SLC35F5Q8WV83 523 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 UGT1A7Q9HAW7 530 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 UGT1A10Q9HAW8 530 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 UGT1A8Q9HAW9 530 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 SMPD3Q9NY59 655 aaPredicted RBP15.74■□□□□ 0.11
USP42-201ENST00000306177 COQ6Q9Y2Z9 468 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 PCDHGA11Q9Y5H2 935 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 FAM86C2PA6NEL3 165 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 LIN7AO14910 233 aaPredicted RBP15.74■□□□□ 0.11
USP42-201ENST00000306177 TCF4P15884 667 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 RPS24P62847 133 aaKnown RBP15.74■□□□□ 0.11
USP42-201ENST00000306177 ADGRF1Q5T601 910 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 MSANTD2Q6P1R3 559 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 ARL10Q8N8L6 244 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 LRRC15Q8TF66 581 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 PCBD2Q9H0N5 130 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 DIABLOQ9NR28 239 aa15.74■□□□□ 0.11
USP42-201ENST00000306177 LRRC72A6NJI9 287 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 C9JVG2 144 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 MCIDASD6RGH6 385 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 TULP2O00295 520 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 TNFRSF11BO00300 401 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 ENPP3O14638 875 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 IFNW1P05000 195 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 CARD16Q5EG05 197 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 TXNRD3NBQ6F5E7 133 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 GALNT5Q7Z7M9 940 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 WFIKKN2Q8TEU8 576 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 HBEGFQ99075 208 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 ABCB10Q9NRK6 738 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 KDM3BQ7LBC6 1761 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 ILVBLA1L0T0 632 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 BCKDKO14874 412 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 KERAO60938 352 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 CAPGP40121 348 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 UBXN11Q5T124 520 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 DDI2Q5TDH0 399 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 FBXL22Q6P050 247 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 ZNF730Q6ZMV8 503 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 DNAJB7Q7Z6W7 309 aaPredicted RBP15.73■□□□□ 0.11
USP42-201ENST00000306177 UNC5BQ8IZJ1 945 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 ZNF563Q8TA94 476 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 CENPNQ96H22 339 aaPredicted RBP15.73■□□□□ 0.11
USP42-201ENST00000306177 TMEM175Q9BSA9 504 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 C11orf84Q9BUA3 381 aaPredicted RBP15.73■□□□□ 0.11
USP42-201ENST00000306177 ZDHHC4Q9NPG8 344 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 ITPKBP27987 946 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 GPR33Q49SQ1 333 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms