RNA–Protein interactions for RNA: ENST00000304786.11

SRP9-201, Transcript of signal recognition particle 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP9, Length 1,480 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9-201ENST00000304786 LKAAEAR1Q8TD35 194 aa13.22□□□□□ -0.29
SRP9-201ENST00000304786 ZCCHC14Q8WYQ9 949 aaKnown RBP13.22□□□□□ -0.29
SRP9-201ENST00000304786 PRR11Q96HE9 360 aaPredicted RBP13.22□□□□□ -0.29
SRP9-201ENST00000304786 SIGLEC10Q96LC7 697 aa13.22□□□□□ -0.29
SRP9-201ENST00000304786 LINC00615Q96LM1 132 aaPredicted RBP13.22□□□□□ -0.29
SRP9-201ENST00000304786 RMDN2Q96LZ7 410 aa13.22□□□□□ -0.29
SRP9-201ENST00000304786 C16orf45Q96MC5 204 aaPredicted RBP13.22□□□□□ -0.29
SRP9-201ENST00000304786 NRTNQ99748 197 aa13.22□□□□□ -0.29
SRP9-201ENST00000304786 CCM2Q9BSQ5 444 aa13.22□□□□□ -0.29
SRP9-201ENST00000304786 NRSN2Q9GZP1 204 aa13.22□□□□□ -0.29
SRP9-201ENST00000304786 WASH6PQ9NQA3 447 aa13.22□□□□□ -0.29
SRP9-201ENST00000304786 ZMIZ1Q9ULJ6 1067 aa13.22□□□□□ -0.29
SRP9-201ENST00000304786 AP3B1O00203 1094 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 CD3EAPO15446 510 aaKnown RBP13.21□□□□□ -0.3
SRP9-201ENST00000304786 BRINP1O60477 761 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 KCNJ13O60928 360 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 SLC2A4P14672 509 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 TYRP1P17643 537 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 ITGB6P18564 788 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 PDHA2P29803 388 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 MAGEA3P43357 314 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 PREPP48147 710 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 INHBCP55103 352 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 SARNPP82979 210 aaKnown RBP13.21□□□□□ -0.3
SRP9-201ENST00000304786 DR1Q01658 176 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 C2orf54Q08AI8 447 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 ITIH4Q14624 930 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 C16orf72Q14CZ0 275 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 BRD3Q15059 726 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 MSS51Q4VC12 460 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 FASTKD1Q53R41 847 aaKnown RBP13.21□□□□□ -0.3
SRP9-201ENST00000304786 CASC4Q6P4E1 433 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 TMEM26Q6ZUK4 368 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 PIM3Q86V86 326 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 SPNS2Q8IVW8 549 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 TRIM48Q8IWZ4 208 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 RCBTB1Q8NDN9 531 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 HEXDCQ8WVB3 486 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 PEX13Q92968 403 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 CXorf40BQ96DE9 158 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 TRIM31Q9BZY9 425 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 COG4Q9H9E3 785 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 MRM3Q9HC36 420 aaKnown RBP13.21□□□□□ -0.3
SRP9-201ENST00000304786 SLC40A1Q9NP59 571 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 CATSPERZQ9NTU4 200 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 OGFRQ9NZT2 677 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 ZZEF1O43149 2961 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 CELSR3Q9NYQ7 3312 aa13.21□□□□□ -0.3
SRP9-201ENST00000304786 IGHV5-10-1A0A0J9YXX1 117 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 SDR42E2A6NKP2 422 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 IQCF5A8MTL0 148 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 TLX3O43711 291 aaPredicted RBP13.2□□□□□ -0.3
SRP9-201ENST00000304786 CPNE6O95741 557 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 MLNP12872 115 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 NSG1P42857 185 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 ARCN1P48444 511 aaKnown RBP13.2□□□□□ -0.3
SRP9-201ENST00000304786 PPM1FP49593 454 aaPredicted RBP13.2□□□□□ -0.3
SRP9-201ENST00000304786 GABREP78334 506 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 GPR18Q14330 331 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 ST3GAL2Q16842 350 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 ANKRD20A4Q4UJ75 823 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 PHF19Q5T6S3 580 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 PACS1Q6VY07 963 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 HM13Q8TCT9 377 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 NCSTNQ92542 709 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 ZNF669Q96BR6 464 aaPredicted RBP13.2□□□□□ -0.3
SRP9-201ENST00000304786 SGSM3Q96HU1 749 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 CCDC74BQ96LY2 380 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 C12orf66Q96MD2 445 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 XAB2Q9HCS7 855 aaKnown RBP13.2□□□□□ -0.3
SRP9-201ENST00000304786 IMP3Q9NV31 184 aaKnown RBP13.2□□□□□ -0.3
SRP9-201ENST00000304786 RNF14Q9UBS8 474 aa13.2□□□□□ -0.3
SRP9-201ENST00000304786 ACACAQ13085 2346 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 ZCWPW2A0A1B0GU75 182 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 CCDC188H7C350 402 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 TP73O15350 636 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 AP2A2O94973 939 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 MTHFD1P11586 935 aaKnown RBP13.19□□□□□ -0.3
SRP9-201ENST00000304786 CCKBRP32239 447 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 ETV5P41161 510 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 HALP42357 657 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 CSE1LP55060 971 aaKnown RBP13.19□□□□□ -0.3
SRP9-201ENST00000304786 DHX9Q08211 1270 aaKnown RBP13.19□□□□□ -0.3
SRP9-201ENST00000304786 SQSTM1Q13501 440 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 ZNF789Q5FWF6 425 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 SNAP47Q5SQN1 464 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 HP1BP3Q5SSJ5 553 aaPredicted RBP13.19□□□□□ -0.3
SRP9-201ENST00000304786 CAPRIN2Q6IMN6 1127 aaKnown RBP13.19□□□□□ -0.3
SRP9-201ENST00000304786 IGDCC3Q8IVU1 814 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 UNC5BQ8IZJ1 945 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 KRT222Q8N1A0 295 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 PHC3Q8NDX5 983 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 SPATA4Q8NEY3 305 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.19□□□□□ -0.3
SRP9-201ENST00000304786 SH3KBP1Q96B97 665 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 NXPE2Q96DL1 559 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 AHCYL2Q96HN2 611 aaKnown RBP13.19□□□□□ -0.3
SRP9-201ENST00000304786 OR52A5Q9H2C5 316 aa13.19□□□□□ -0.3
SRP9-201ENST00000304786 STN1Q9H668 368 aaKnown RBP13.19□□□□□ -0.3
SRP9-201ENST00000304786 POLR1BQ9H9Y6 1135 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms