RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 LAPTM5Q13571 262 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 ZNF782Q6ZMW2 699 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-201ENST00000302528 BEND4Q6ZU67 534 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 RBM23Q86U06 439 aaKnown RBP10.28□□□□□ -0.76
CLIP1-201ENST00000302528 CIR1Q86X95 450 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-201ENST00000302528 GALNT13Q8IUC8 556 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 PRSS58Q8IYP2 241 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 OR6K6Q8NGW6 343 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 HELQQ8TDG4 1101 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 S100PBPQ96BU1 408 aa10.28□□□□□ -0.76
CLIP1-201ENST00000302528 GLYATL1P3A0A0U1RQE8 302 aa10.27□□□□□ -0.76
CLIP1-201ENST00000302528 CLDN25C9JDP6 229 aa10.27□□□□□ -0.76
CLIP1-201ENST00000302528 CDK14O94921 469 aa10.27□□□□□ -0.76
CLIP1-201ENST00000302528 PRAMEF12O95522 483 aa10.27□□□□□ -0.76
CLIP1-201ENST00000302528 SHBGP04278 402 aa10.27□□□□□ -0.76
CLIP1-201ENST00000302528 GOT1P17174 413 aa10.27□□□□□ -0.76
CLIP1-201ENST00000302528 HSPB3Q12988 150 aa10.27□□□□□ -0.76
CLIP1-201ENST00000302528 AUHQ13825 339 aaKnown RBP10.27□□□□□ -0.76
CLIP1-201ENST00000302528 ZNF565Q8N9K5 539 aa10.27□□□□□ -0.76
CLIP1-201ENST00000302528 FBXO15Q8NCQ5 510 aaPredicted RBP10.27□□□□□ -0.76
CLIP1-201ENST00000302528 PHC3Q8NDX5 983 aa10.27□□□□□ -0.76
CLIP1-201ENST00000302528 OR2T34Q8NGX1 318 aa10.27□□□□□ -0.76
CLIP1-201ENST00000302528 OR2T3Q8NH03 318 aa10.27□□□□□ -0.76
CLIP1-201ENST00000302528 SUN3Q8TAQ9 357 aa10.27□□□□□ -0.76
CLIP1-201ENST00000302528 ASB12Q8WXK4 309 aa10.27□□□□□ -0.76
CLIP1-201ENST00000302528 CLPTM1LQ96KA5 538 aa10.27□□□□□ -0.76
CLIP1-201ENST00000302528 CNDP2Q96KP4 475 aaKnown RBP10.27□□□□□ -0.76
CLIP1-201ENST00000302528 TLR10Q9BXR5 811 aa10.27□□□□□ -0.76
CLIP1-201ENST00000302528 DAPL1A0PJW8 107 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 ZNF726A6NNF4 738 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 ADAMDEC1O15204 470 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 IFI30P13284 250 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 TUBG1P23258 451 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 YAP1P46937 504 aaKnown RBP10.27□□□□□ -0.77
CLIP1-201ENST00000302528 FOXM1Q08050 763 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 MAMLD1Q13495 774 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 NOMO2Q5JPE7 1267 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 PIGZQ86VD9 579 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 CPA6Q8N4T0 437 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 ZBTB2Q8N680 514 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 ZCCHC10Q8TBK6 192 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 TMCO6Q96DC7 493 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 ABCD2Q9UBJ2 740 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 ITSN1Q15811 1721 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 A0A1B0GVC2 190 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 E7EQ34 232 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 TPST2O60704 377 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 WFS1O76024 890 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 CSTBP04080 98 aaKnown RBP10.27□□□□□ -0.77
CLIP1-201ENST00000302528 PCCBP05166 539 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 MSL3P1P0C860 447 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 ACVR2AP27037 513 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 RFX5P48382 616 aaPredicted RBP10.27□□□□□ -0.77
CLIP1-201ENST00000302528 PSMD8P48556 350 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 SLC20A2Q08357 652 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 GRK1Q15835 563 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 SCGB2B2Q4G0G5 96 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 CDKAL1Q5VV42 579 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 AADACL2Q6P093 401 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 CLIP4Q8N3C7 705 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 SMG7Q92540 1137 aaKnown RBP10.27□□□□□ -0.77
CLIP1-201ENST00000302528 UCK2Q9BZX2 261 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 ANKRA2Q9H9E1 313 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 FANCFQ9NPI8 374 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 PARPBPQ9NWS1 579 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 COMMD3Q9UBI1 195 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 PREX1Q8TCU6 1659 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 LOC100509620A0A075B734 347 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 A0A1W2PRQ8 180 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 RNASEH2AO75792 299 aaKnown RBP10.27□□□□□ -0.77
CLIP1-201ENST00000302528 OAZ2O95190 189 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 ABHD2P08910 425 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 POU2F1P14859 743 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 SLC7A1P30825 629 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 ADCYAP1R1P41586 468 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 NAE1Q13564 534 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 NBPF12Q5TAG4 269 aaPredicted RBP10.27□□□□□ -0.77
CLIP1-201ENST00000302528 POTEHQ6S545 545 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 FIP1L1Q6UN15 594 aaKnown RBP10.27□□□□□ -0.77
CLIP1-201ENST00000302528 SYNPOQ8N3V7 929 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 MRPL45Q9BRJ2 306 aaKnown RBP10.27□□□□□ -0.77
CLIP1-201ENST00000302528 MOV10Q9HCE1 1003 aaKnown RBP10.27□□□□□ -0.77
CLIP1-201ENST00000302528 SMPD3Q9NY59 655 aaPredicted RBP10.27□□□□□ -0.77
CLIP1-201ENST00000302528 PCDHGB7Q9Y5F8 929 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 PAPSS1O43252 624 aaPredicted RBP10.27□□□□□ -0.77
CLIP1-201ENST00000302528 CHRM5P08912 532 aaPredicted RBP10.27□□□□□ -0.77
CLIP1-201ENST00000302528 PRKCHP24723 683 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 SLC6A4P31645 630 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 TIE1P35590 1138 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 WNT3AP56704 352 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 ECT2LQ008S8 904 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 CSTF1Q05048 431 aaKnown RBP10.27□□□□□ -0.77
CLIP1-201ENST00000302528 BLMHQ13867 455 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 SLC30A10Q6XR72 485 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 ZNF676Q8N7Q3 588 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 TMEM145Q8NBT3 493 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 THAP6Q8TBB0 222 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 MKL1Q969V6 931 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 ZNF670Q9BS34 389 aa10.27□□□□□ -0.77
CLIP1-201ENST00000302528 CORO1CQ9ULV4 474 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms