RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 RALBP11234 206 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 BRAFP15056 766 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 GNSP15586 552 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 CREB1P16220 341 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 KELP23276 732 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 AK4P27144 223 aaPredicted RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 SERPINB9P50453 376 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 CLCNKAP51800 687 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 CTBSQ01459 385 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 POU4F1Q01851 419 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 PPARDQ03181 441 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 BNIP3Q12983 259 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 GRIK2Q13002 908 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 NFE2L1Q14494 772 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 PLA2G4EQ3MJ16 856 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 ACSBG2Q5FVE4 666 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 METRNLQ641Q3 311 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 PTRHD1Q6GMV3 140 aaKnown RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 LAIR1Q6GTX8 287 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 FAM45BPQ6NSW5 357 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 HDXQ7Z353 690 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 RD3Q7Z3Z2 195 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 TRAPPC5Q8IUR0 188 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 HID1Q8IV36 788 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 PHACTR4Q8IZ21 702 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 PLD6Q8N2A8 252 aaKnown RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 SLC25A45Q8N413 288 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 GPATCH11Q8N954 259 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 OR2I1PQ8NGU4 316 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 GABPB2Q8TAK5 448 aaPredicted RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 FAM45AQ8TCE6 357 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 ELMO2Q96JJ3 720 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 GPR78Q96P69 363 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 OR2M4Q96R27 311 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 SH3GL2Q99962 352 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 CCDC77Q9BR77 488 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 TIMM29Q9BSF4 260 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 LRRC61Q9BV99 259 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 ZCCHC2Q9C0B9 1178 aaKnown RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 PPCSQ9HAB8 311 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 RXFP3Q9NSD7 469 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 SPATS2LQ9NUQ6 558 aaKnown RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 UCKL1Q9NWZ5 548 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 TRNAU1APQ9NX07 287 aaKnown RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 KLHL42Q9P2K6 505 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 SUSD2Q9UGT4 822 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 SLC39A10Q9ULF5 831 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 SLC6A14Q9UN76 642 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 WDR37Q9Y2I8 494 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 TMEM131Q92545 1883 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 SPEGQ15772 3267 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 PROB1E7EW31 1015 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 H3BMM5 538 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 QSOX1O00391 747 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 TPP1O14773 563 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 PFDN6O15212 129 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 MAGEC1O60732 1142 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 RASGRP1O95267 797 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 SYF2O95926 243 aaKnown RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 TOP3BO95985 862 aaKnown RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 TNFP01375 233 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 RETP07949 1114 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 ACP5P13686 325 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 JUNDP17535 347 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 CHRM3P20309 590 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 CNTFP26441 200 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 ACADLP28330 430 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 RAB10P61026 200 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 IRF9Q00978 393 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 DNAJC3Q13217 504 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 C1orf61Q13536 156 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 USP10Q14694 798 aaKnown RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 HLA-BQ31612 363 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 TRIM61Q5EBN2 209 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 CEP85LQ5SZL2 805 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 CLEC14AQ86T13 490 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 TRABD2AQ86V40 505 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 AMZ2Q86W34 360 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 GALNT13Q8IUC8 556 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 CENPLQ8N0S6 344 aaPredicted RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 RIBC1Q8N443 379 aaPredicted RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 TMEM151AQ8N4L1 468 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 CEP76Q8TAP6 659 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 EEF1AKMT1Q8WVE0 214 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 DLG3Q92796 817 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 ATOH1Q92858 354 aaPredicted RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 ARL8AQ96BM9 186 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 ELF4Q99607 663 aaPredicted RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 OR52A5Q9H2C5 316 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 COG4Q9H9E3 785 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 TMBIM4Q9HC24 238 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 PARD6AQ9NPB6 346 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 SNX15Q9NRS6 342 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 DNAJC28Q9NX36 388 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 TAS2R13Q9NYV9 303 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 SCHIP1Q9P0W5 487 aaPredicted RBP9.31□□□□□ -0.92
RFX3-201ENST00000302303 TXNDC16Q9P2K2 825 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 TBC1D29Q9UFV1 150 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 MOSPD1Q9UJG1 213 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 PCOLCE2Q9UKZ9 415 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms