RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 EFHD2Q96C19 240 aaPredicted RBP11.27□□□□□ -0.61
TRUB1-201ENST00000298746 SMOQ99835 787 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 MYOCQ99972 504 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 NACA2Q9H009 215 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 RUBCNLQ9H714 662 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 KAT8Q9H7Z6 458 aaKnown RBP11.27□□□□□ -0.61
TRUB1-201ENST00000298746 ELP3Q9H9T3 547 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 NTN4Q9HB63 628 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 EXOSC4Q9NPD3 245 aaKnown RBP11.27□□□□□ -0.61
TRUB1-201ENST00000298746 CATSPERZQ9NTU4 200 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 CAB39Q9Y376 341 aaPredicted RBP11.27□□□□□ -0.61
TRUB1-201ENST00000298746 NRCAMQ92823 1304 aa11.27□□□□□ -0.61
TRUB1-201ENST00000298746 NOTOA8MTQ0 251 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 ARVCFO00192 962 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 TFECO14948 347 aaPredicted RBP11.26□□□□□ -0.61
TRUB1-201ENST00000298746 MAFKO60675 156 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 ECI2O75521 394 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 EEDO75530 441 aaKnown RBP11.26□□□□□ -0.61
TRUB1-201ENST00000298746 MED26O95402 600 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 MT-ND2P03891 347 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 CNPP09543 421 aaKnown RBP11.26□□□□□ -0.61
TRUB1-201ENST00000298746 MSH3P20585 1137 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 EDNRBP24530 442 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 CD40LGP29965 261 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 SLC10A7Q0GE19 358 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 HIST2H2ACQ16777 129 aaPredicted RBP11.26□□□□□ -0.61
TRUB1-201ENST00000298746 PTPRNQ16849 979 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 C6orf136Q5SQH8 315 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 CATSPEREQ5SY80 951 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 SVOPQ8N4V2 548 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 EFHBQ8N7U6 833 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 OR6Q1Q8NGQ2 317 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 KLRG1Q96E93 195 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 PPP1R2P1Q96PQ5 205 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 GPR21Q99679 349 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 DPY30Q9C005 99 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 ABCG8Q9H221 673 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 AGO3Q9H9G7 860 aaKnown RBP11.26□□□□□ -0.61
TRUB1-201ENST00000298746 TRMT6Q9UJA5 497 aaKnown RBP11.26□□□□□ -0.61
TRUB1-201ENST00000298746 ELOVL7A1L3X0 281 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 CASTOR2A6NHX0 329 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 PRMT5O14744 637 aaPredicted RBP11.26□□□□□ -0.61
TRUB1-201ENST00000298746 SLC7A4O43246 635 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 AIREO43918 545 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 CYP11A1P05108 521 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 PPP5CP53041 499 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 ARPC4P59998 168 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 EMX2Q04743 252 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 CTF1Q16619 201 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 SMN1Q16637 294 aaKnown RBP11.26□□□□□ -0.61
TRUB1-201ENST00000298746 FAM174BQ3ZCQ3 159 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 KANK2Q63ZY3 851 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 TRAF7Q6Q0C0 670 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 SLC16A12Q6ZSM3 486 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 SYVN1Q86TM6 617 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 GPSM1Q86YR5 675 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 SCAMP5Q8TAC9 235 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 NT5C3BQ969T7 300 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 AKIP1Q9NQ31 210 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 DERAQ9Y315 318 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 IFT52Q9Y366 437 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 ZNF831Q5JPB2 1677 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 J3KR12 359 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 CXCR6O00574 342 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 CAPN1P07384 714 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 UROSP10746 265 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 IGFBP6P24592 240 aaPredicted RBP11.26□□□□□ -0.61
TRUB1-201ENST00000298746 HOXA11P31270 313 aaPredicted RBP11.26□□□□□ -0.61
TRUB1-201ENST00000298746 CLCA4Q14CN2 919 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 SPANXN2Q5MJ10 180 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 IRAK1BP1Q5VVH5 260 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 DNAJB3Q8WWF6 145 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 ATL1Q8WXF7 558 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 ULK4Q96C45 1275 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 ZNF486Q96H40 463 aaPredicted RBP11.26□□□□□ -0.61
TRUB1-201ENST00000298746 CTRCQ99895 268 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 SEMA3CQ99985 751 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 APOL4Q9BPW4 351 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 APOL5Q9BWW9 433 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 NUAK2Q9H093 628 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 CRTAC1Q9NQ79 661 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 TBC1D14Q9P2M4 693 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 PCDHGA3Q9Y5H0 932 aa11.26□□□□□ -0.61
TRUB1-201ENST00000298746 PIRO00625 290 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 CYP7B1O75881 506 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 SERPINA1P01009 418 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 LCKP06239 509 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 FGF4P08620 206 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 TGM1P22735 817 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 SCAPQ12770 1279 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 SEMA3BQ13214 749 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 CDK5R2Q13319 367 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 AAK1Q2M2I8 961 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 DESI1Q6ICB0 168 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 CYP20A1Q6UW02 462 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 PAQR9Q6ZVX9 377 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 AMER2Q8N7J2 671 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 OR4L1Q8NH43 312 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 BPIFB1Q8TDL5 484 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 SPON2Q9BUD6 331 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms