RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 GSTA4O15217 222 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 MTSS1O43312 755 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 PIRTP0C851 137 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 KCNK10P57789 538 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 MTPNP58546 118 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 DSC2Q02487 901 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 PFKFB4Q16877 469 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 AGAP7PQ5VUJ5 663 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 THEM5Q8N1Q8 247 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 PELI3Q8N2H9 469 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 MCFD2Q8NI22 146 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 PSMG2Q969U7 264 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 ESAMQ96AP7 390 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 VAT1Q99536 393 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 MRPL57Q9BQC6 102 aaKnown RBP11.9□□□□□ -0.5
CLPB-201ENST00000294053 ASPSCR1Q9BZE9 553 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 RNF186Q9NXI6 227 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 ACTR3BQ9P1U1 418 aa11.9□□□□□ -0.5
CLPB-201ENST00000294053 AQP12BA6NM10 295 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 TFECO14948 347 aaPredicted RBP11.9□□□□□ -0.51
CLPB-201ENST00000294053 SLC10A3P09131 477 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 ADRA1AP35348 466 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 CD86P42081 329 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 FOXA1P55317 472 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 IFITM2Q01629 132 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 EPS8Q12929 822 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 PCID2Q5JVF3 399 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 GPR158Q5T848 1215 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 GLYATQ6IB77 296 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 CCSAPQ6IQ19 270 aaPredicted RBP11.9□□□□□ -0.51
CLPB-201ENST00000294053 AQP12AQ8IXF9 295 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 ADAMTS16Q8TE57 1224 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 SLC22A17Q8WUG5 538 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 ATL1Q8WXF7 558 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 IGSF8Q969P0 613 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 NCLNQ969V3 563 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 NSUN5Q96P11 429 aaKnown RBP11.9□□□□□ -0.51
CLPB-201ENST00000294053 PRM3Q9NNZ6 103 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 SEMA4BQ9NPR2 832 aaPredicted RBP11.9□□□□□ -0.51
CLPB-201ENST00000294053 INTS7Q9NVH2 962 aaKnown RBP11.9□□□□□ -0.51
CLPB-201ENST00000294053 DKK3Q9UBP4 350 aa11.9□□□□□ -0.51
CLPB-201ENST00000294053 LOC100506127A0A0U1RQW1 187 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 H0Y626 953 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 CACNG3O60359 315 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 TRIM16O95361 564 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 PEX11BO96011 259 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 FCGR1AP12314 374 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 CRHBPP24387 322 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 WNT3AP56704 352 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 ATP6V0D1P61421 351 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 NRG1Q02297 640 aaPredicted RBP11.89□□□□□ -0.51
CLPB-201ENST00000294053 TRIM71Q2Q1W2 868 aaKnown RBP11.89□□□□□ -0.51
CLPB-201ENST00000294053 ADPRMQ3LIE5 342 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 RAP1GAP2Q684P5 730 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 RSPO2Q6UXX9 243 aaPredicted RBP11.89□□□□□ -0.51
CLPB-201ENST00000294053 PDPRQ8NCN5 879 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 DEPDC7Q96QD5 511 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 FCRL5Q96RD9 977 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 UHRF1Q96T88 793 aaPredicted RBP11.89□□□□□ -0.51
CLPB-201ENST00000294053 PRRG3Q9BZD7 231 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 RASSF1Q9NS23 344 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 IL37Q9NZH6 218 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 B3GNT3Q9Y2A9 372 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 ANKRD6Q9Y2G4 727 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 USP34Q70CQ2 3546 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 PDZK1P1A8MUH7 402 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 UBFD1O14562 309 aaKnown RBP11.89□□□□□ -0.51
CLPB-201ENST00000294053 RFPL2O75678 378 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 CKBP12277 381 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 CPB1P15086 417 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 TGM1P22735 817 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 FMO4P31512 558 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 PIGAP37287 484 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 LEPRP48357 1165 aaKnown RBP11.89□□□□□ -0.51
CLPB-201ENST00000294053 CSRP3P50461 194 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 OR4D2P58180 307 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 CHRNB3Q05901 458 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 CD47Q08722 323 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 TRIP4Q15650 581 aaPredicted RBP11.89□□□□□ -0.51
CLPB-201ENST00000294053 NDUFA5Q16718 116 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 C6orf141Q5SZD1 244 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 PIM3Q86V86 326 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 TBC1D21Q8IYX1 336 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 RTL3Q8N8U3 475 aaKnown RBP11.89□□□□□ -0.51
CLPB-201ENST00000294053 FAM83FQ8NEG4 500 aaPredicted RBP11.89□□□□□ -0.51
CLPB-201ENST00000294053 LILRB4Q8NHJ6 448 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 ITFG1Q8TB96 612 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 CDK5RAP1Q96SZ6 601 aaKnown RBP11.89□□□□□ -0.51
CLPB-201ENST00000294053 BEX2Q9BXY8 128 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 TRPV5Q9NQA5 729 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 LIMD1Q9UGP4 676 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 PRELID1Q9Y255 219 aa11.89□□□□□ -0.51
CLPB-201ENST00000294053 AAR2Q9Y312 384 aaKnown RBP11.89□□□□□ -0.51
CLPB-201ENST00000294053 G3V2T6 193 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 SPNP16150 400 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 GGT5P36269 586 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 ARSDP51689 593 aa11.88□□□□□ -0.51
CLPB-201ENST00000294053 MLLT6P55198 1093 aaPredicted RBP11.88□□□□□ -0.51
CLPB-201ENST00000294053 GRSF1Q12849 480 aaKnown RBP eCLIP11.88□□□□□ -0.51
CLPB-201ENST00000294053 MS4A13Q5J8X5 152 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms