RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 CCT8P50990 548 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 SRP54P61011 504 aaKnown RBP13.13□□□□□ -0.31
PSMB4-201ENST00000290541 PRAMEP78395 509 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 FOXK1P85037 733 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 CACNG1Q06432 222 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 BNIP3Q12983 259 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 ITGA9Q13797 1035 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 PTK2BQ14289 1009 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 HLTFQ14527 1009 aaKnown RBP eCLIP13.13□□□□□ -0.31
PSMB4-201ENST00000290541 CRYMQ14894 314 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 STEAP4Q687X5 459 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 TRMT10BQ6PF06 316 aaKnown RBP13.13□□□□□ -0.31
PSMB4-201ENST00000290541 AFTPHQ6ULP2 937 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 CENPUQ71F23 418 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 RD3Q7Z3Z2 195 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 PARGQ86W56 976 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 TICAM1Q8IUC6 712 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 HID1Q8IV36 788 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 IFT20Q8IY31 132 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 GSPT2Q8IYD1 628 aaKnown RBP13.13□□□□□ -0.31
PSMB4-201ENST00000290541 NXPE1Q8N323 547 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 DCBLD1Q8N8Z6 715 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 DDHD1Q8NEL9 900 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 OR56A4Q8NGH8 313 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 GDAP1Q8TB36 358 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 SKA1Q96BD8 255 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 BOCQ9BWV1 1114 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 OR2AG1Q9H205 316 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 ERVMER34-1Q9H9K5 563 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 TRIM39Q9HCM9 518 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 CYP4F12Q9HCS2 524 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 DNAJC28Q9NX36 388 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 KLQ9UEF7 1012 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 ZC3H7BQ9UGR2 993 aaKnown RBP13.13□□□□□ -0.31
PSMB4-201ENST00000290541 CRLS1Q9UJA2 301 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 NFU1Q9UMS0 254 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 SUFUQ9UMX1 484 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 FAM169AQ9Y6X4 670 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 PCNX1Q96RV3 2341 aa13.13□□□□□ -0.31
PSMB4-201ENST00000290541 A0A1B0GTQ1 180 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 PRSS38A1L453 326 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 CD3EAPO15446 510 aaKnown RBP13.12□□□□□ -0.31
PSMB4-201ENST00000290541 SGTAO43765 313 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 SDC3O75056 442 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 DXOO77932 396 aaKnown RBP13.12□□□□□ -0.31
PSMB4-201ENST00000290541 CSF2P04141 144 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 ITGB2P05107 769 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 POLBP06746 335 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 MYBL2P10244 700 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 ERVK-10P10266 1014 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 JUNDP17535 347 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 ACRV1P26436 265 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 HTR1BP28222 390 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 MAGEA4P43358 317 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 CTSCP53634 463 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 TMEM115Q12893 351 aaPredicted RBP13.12□□□□□ -0.31
PSMB4-201ENST00000290541 C1orf61Q13536 156 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 NAA30Q147X3 362 aaPredicted RBP13.12□□□□□ -0.31
PSMB4-201ENST00000290541 ARMC3Q5W041 872 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 XKR5Q6UX68 686 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 CAPN12Q6ZSI9 719 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 DET1Q7L5Y6 550 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 PHYKPLQ8IUZ5 450 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 PHACTR4Q8IZ21 702 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 RASGEF1AQ8N9B8 481 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 CCL4L1Q8NHW4 92 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 ULK4Q96C45 1275 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 LRRC39Q96DD0 335 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 SCARF2Q96GP6 870 aaPredicted RBP13.12□□□□□ -0.31
PSMB4-201ENST00000290541 C9orf72Q96LT7 481 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 ELF4Q99607 663 aaPredicted RBP13.12□□□□□ -0.31
PSMB4-201ENST00000290541 CATSPERZQ9NTU4 200 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 C20orf96Q9NUD7 363 aaPredicted RBP13.12□□□□□ -0.31
PSMB4-201ENST00000290541 UCKL1Q9NWZ5 548 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 SLC17A6Q9P2U8 582 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 ST14Q9Y5Y6 855 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 PRSS21Q9Y6M0 314 aa13.12□□□□□ -0.31
PSMB4-201ENST00000290541 TNFRSF10CO14798 259 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 EIF3HO15372 352 aaKnown RBP eCLIP13.11□□□□□ -0.31
PSMB4-201ENST00000290541 OR1I1O60431 355 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 PIAS1O75925 651 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 FAM153BP0C7A2 387 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 NME1P15531 152 aaKnown RBP13.11□□□□□ -0.31
PSMB4-201ENST00000290541 SSTR1P30872 391 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 GNPDA1P46926 289 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 RXRGP48443 463 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 HK3P52790 923 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 GPX6P59796 221 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 PPARDQ03181 441 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 CUL1Q13616 776 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 ERCC6LQ2NKX8 1250 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 INAVAQ3KP66 663 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 FAM153CQ494X1 144 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 GPR33Q49SQ1 333 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 FASTKD1Q53R41 847 aaKnown RBP13.11□□□□□ -0.31
PSMB4-201ENST00000290541 ZNF789Q5FWF6 425 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 SPANXN3Q5MJ09 141 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 LDLRAP1Q5SW96 308 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 NEPROQ6NW34 567 aa13.11□□□□□ -0.31
PSMB4-201ENST00000290541 GATAD2AQ86YP4 633 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms