RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 WDR6Q9NNW5 1121 aaKnown RBP11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 MYOCOSA0A1B0GUC4 107 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 PSIP1O75475 530 aaKnown RBP11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 EPN2O95208 641 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 MZF1P28698 734 aaPredicted RBP11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 HOXA11P31270 313 aaPredicted RBP11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 SCNN1AP37088 669 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 NUP62P37198 522 aaPredicted RBP11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 MERTKQ12866 999 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 INSCQ1MX18 579 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 ZNF423Q2M1K9 1284 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 MILR1Q7Z6M3 343 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 PEX5LQ8IYB4 626 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 NSMCE3Q96MG7 304 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 IL22Q9GZX6 179 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 CRISPLD1Q9H336 500 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 BAIAP2Q9UQB8 552 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 A0A1W2PRG6 482 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 AIREO43918 545 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 GNAZP19086 355 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 PSMD8P48556 350 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 CDC42P60953 191 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 CSNK2BP67870 215 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 DNASE1L3Q13609 305 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 IL23RQ5VWK5 629 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 ZDHHC20Q5W0Z9 365 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 GALNT5Q7Z7M9 940 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 SLC22A16Q86VW1 577 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 FEM1CQ96JP0 617 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 ZFP37Q9Y6Q3 630 aaPredicted RBP11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 CCDC162PA2VCL2 907 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 PAPSS1O43252 624 aaPredicted RBP11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 RNASEH2AO75792 299 aaKnown RBP11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 STT3AP46977 705 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 MPP2Q14168 576 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 CLLU1OSQ5K130 101 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 RAET1GQ6H3X3 334 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 GLYATQ6IB77 296 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 TAC4Q86UU9 113 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 CFAP52Q8N1V2 620 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 MCOLN3Q8TDD5 553 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 NACC2Q96BF6 587 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 PKP2Q99959 881 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 CHCHD6Q9BRQ6 235 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 C8orf33Q9H7E9 229 aaPredicted RBP11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 ZNF395Q9H8N7 513 aaPredicted RBP11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 CACNG4Q9UBN1 327 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 PSME2Q9UL46 239 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 TRAF6Q9Y4K3 522 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 SSC5DA1L4H1 1573 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 GNG14A0A1W2PPG7 69 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 ITGAXP20702 1163 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 JAM2P57087 298 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 RAB10P61026 200 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 CAMK2GQ13555 558 aaPredicted RBP11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 PITRM1Q5JRX3 1037 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 MARCH8Q5T0T0 291 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 TMEM214Q6NUQ4 689 aaKnown RBP11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 CPNE8Q86YQ8 564 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 STK40Q8N2I9 435 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 CASD1Q96PB1 797 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 FEM1AQ9BSK4 669 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 PRRG3Q9BZD7 231 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 ABCB9Q9NP78 766 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 TAS2R13Q9NYV9 303 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 SH3BP4Q9P0V3 963 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 TBC1D30Q9Y2I9 924 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 BTN3A1O00481 513 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 PPEF2O14830 753 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 FOXD2O60548 495 aaPredicted RBP11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 SCN1BQ07699 218 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 MYLK3Q32MK0 819 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 DCAF12L1Q5VU92 463 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 TXNDC8Q6A555 127 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 MZT2AQ6P582 158 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 UBE2J2Q8N2K1 259 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 SLC7A6OSQ96CW6 309 aaPredicted RBP11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 SHISA4Q96DD7 197 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 TBATAQ96M53 351 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 GATA5Q9BWX5 397 aaPredicted RBP11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 OSBPL10Q9BXB5 764 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 EPB41L4BQ9H329 900 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 ST14Q9Y5Y6 855 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 SPACA6W5XKT8 324 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 EI24O14681 340 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 BCKDKO14874 412 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 PGLSO95336 258 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 DHFRP00374 187 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 INAVAQ3KP66 663 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 DOK6Q6PKX4 331 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 ARMC8Q8IUR7 673 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 CLYBLQ8N0X4 340 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 VPS35Q96QK1 796 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 KAT8Q9H7Z6 458 aaKnown RBP11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 MAGEL2Q9UJ55 1249 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 AP3M1Q9Y2T2 418 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 ANKRD31Q8N7Z5 1873 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 ILVBLA1L0T0 632 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 ZNF182P17025 639 aaPredicted RBP11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 WASP42768 502 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms