RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 UPB1Q9UBR1 384 aa17.32■□□□□ 0.36
PCDHA13-201ENST00000289272 CD48P09326 243 aa17.32■□□□□ 0.36
PCDHA13-201ENST00000289272 KCNJ11Q14654 390 aa17.32■□□□□ 0.36
PCDHA13-201ENST00000289272 AP5B1Q2VPB7 878 aa17.32■□□□□ 0.36
PCDHA13-201ENST00000289272 C12orf65Q9H3J6 166 aaKnown RBP17.32■□□□□ 0.36
PCDHA13-201ENST00000289272 MYH2Q9UKX2 1941 aa17.32■□□□□ 0.36
PCDHA13-201ENST00000289272 GPR25O00155 361 aa17.32■□□□□ 0.36
PCDHA13-201ENST00000289272 HNMTP50135 292 aa17.32■□□□□ 0.36
PCDHA13-201ENST00000289272 NPTX1Q15818 432 aa17.32■□□□□ 0.36
PCDHA13-201ENST00000289272 PPM1JQ5JR12 505 aa17.32■□□□□ 0.36
PCDHA13-201ENST00000289272 ZDHHC20Q5W0Z9 365 aa17.32■□□□□ 0.36
PCDHA13-201ENST00000289272 HEXDCQ8WVB3 486 aa17.32■□□□□ 0.36
PCDHA13-201ENST00000289272 STON2Q8WXE9 905 aa17.32■□□□□ 0.36
PCDHA13-201ENST00000289272 C1QTNF1Q9BXJ1 281 aa17.32■□□□□ 0.36
PCDHA13-201ENST00000289272 RPL36Q9Y3U8 105 aaKnown RBP17.32■□□□□ 0.36
PCDHA13-201ENST00000289272 ARPC2O15144 300 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 VNN1O95497 513 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 BMP7P18075 431 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 LAG3P18627 525 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 WNT3AP56704 352 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 PRAMEF19Q5SWL8 479 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 RBFAQ8N0V3 343 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 FSTL5Q8N475 847 aaPredicted RBP17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 OR52K2Q8NGK3 314 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 SLC7A6OSQ96CW6 309 aaPredicted RBP17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 MED8Q96G25 268 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 SLC9A7Q96T83 725 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 ASB3Q9Y575 518 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 A0A0J9YVX5 310 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 ITGB6P18564 788 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 MBTD1Q05BQ5 628 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 PTGES3Q15185 160 aaKnown RBP17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 ZC3H7AQ8IWR0 971 aaKnown RBP17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 ABRQ12979 859 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 FNDC3BQ53EP0 1204 aaKnown RBP17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 SPRYD7Q5W111 196 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 C11orf65Q8NCR3 313 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 LINGO1Q96FE5 620 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 ACAT2Q9BWD1 397 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 CPNE5Q9HCH3 593 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 MLXQ9UH92 298 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 A0A088AWK7 358 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 PRAMEF33A0A0G2JMD5 474 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 PRAMEF10O60809 474 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 TMEM63AO94886 807 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 ZNF10P21506 573 aaPredicted RBP17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 FLT3LGP49771 235 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 ERVK-8P63133 956 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 TGFBIQ15582 683 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 MBLAC2Q68D91 279 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 PAOXQ6QHF9 649 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 ZDHHC21Q8IVQ6 265 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 PJA1Q8NG27 643 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 PPP1R13LQ8WUF5 828 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 PPM1MQ96MI6 270 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 OAZ3Q9UMX2 235 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 ROBO1Q9Y6N7 1651 aa17.31■□□□□ 0.36
PCDHA13-201ENST00000289272 ZNF487B1APH4 448 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 IMPDH1P20839 514 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 NR4A1P22736 598 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 CD52P31358 61 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 DNAJA1P31689 397 aaKnown RBP17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 EIF5AP63241 154 aaKnown RBP17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 CERCAMQ5T4B2 595 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 C11orf96Q7Z7L8 435 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 SPAG16Q8N0X2 631 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 C8orf48Q96LL4 319 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 TXLNGYQ9BZA5 131 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 ZFP14Q9HCL3 533 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 ZNF142P52746 1687 aaPredicted RBP17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 SMIM28A0A1B0GU29 152 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 CCRL2O00421 344 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 TSPAN4O14817 238 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 UGT2B17O75795 530 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 PRAMEF1O95521 474 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 IFNGP01579 166 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 SUZ12Q15022 739 aaKnown RBP17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 RAP1GAP2Q684P5 730 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 HACD2Q6Y1H2 254 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 RNF38Q9H0F5 515 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 TFB2MQ9H5Q4 396 aaKnown RBP17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 CNTN3Q9P232 1028 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 TEX264Q9Y6I9 313 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 SCN11AQ9UI33 1791 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 C2CD4BA6NLJ0 364 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 SPTLC1O15269 473 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 SLC7A4O43246 635 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 PGLSO95336 258 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 PIGRP01833 764 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 CERS6Q6ZMG9 384 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 GALNT5Q7Z7M9 940 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 MON1AQ86VX9 555 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 CPNE8Q86YQ8 564 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 STYXQ8WUJ0 223 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 GATA6Q92908 595 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 CREB3L1Q96BA8 519 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 FBXL18Q96ME1 805 aa17.3■□□□□ 0.36
PCDHA13-201ENST00000289272 NEK6Q9HC98 313 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms