RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 CD27P26842 260 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 PSMA5P28066 241 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 RFC2P35250 354 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 CCT6AP40227 531 aaKnown RBP4.56□□□□□ -1.68
CD44-202ENST00000278385 NR2C2P49116 596 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 PEX5P50542 639 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 SCNN1GP51170 649 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 RAP2BP61225 183 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 KARSQ15046 597 aaKnown RBP4.56□□□□□ -1.68
CD44-202ENST00000278385 TAZQ16635 292 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 FAM187BQ17R55 369 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 PLA1AQ53H76 456 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 FASTKD1Q53R41 847 aaKnown RBP4.56□□□□□ -1.68
CD44-202ENST00000278385 IGSF11Q5DX21 431 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 RABL3Q5HYI8 236 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 MDH1BQ5I0G3 518 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 FAM171A1Q5VUB5 890 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 DAB2IPQ5VWQ8 1189 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 CDC42EP5Q6NZY7 148 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 MSANTD2Q6P1R3 559 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 OLFML1Q6UWY5 402 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 SERPINA13PQ6UXR4 307 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 NHLRC1Q6VVB1 395 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 SEM1Q6ZVN7 128 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 RRM2BQ7LG56 351 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 HAUS6Q7Z4H7 955 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 CTU1Q7Z7A3 348 aaKnown RBP4.56□□□□□ -1.68
CD44-202ENST00000278385 XYLT1Q86Y38 959 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 ERO1BQ86YB8 467 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 PLXDC1Q8IUK5 500 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 DHX40Q8IX18 779 aaKnown RBP4.56□□□□□ -1.68
CD44-202ENST00000278385 PHC2Q8IXK0 858 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 CADM4Q8NFZ8 388 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 ABHD5Q8WTS1 349 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 PEX13Q92968 403 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 OPTNQ96CV9 577 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 ARSGQ96EG1 525 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 LRIG1Q96JA1 1093 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 SPATA13Q96N96 652 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 EGFL8Q99944 293 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 MESP1Q9BRJ9 268 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 NDC1Q9BTX1 674 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 ZSCAN5AQ9BUG6 496 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.56□□□□□ -1.68
CD44-202ENST00000278385 SPATA5L1Q9BVQ7 753 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 TPPP3Q9BW30 176 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 IDI2Q9BXS1 227 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 KRTAP3-1Q9BYR8 98 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 NACA2Q9H009 215 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 RAB33BQ9H082 229 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 ENKD1Q9H0I2 346 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 ZNF703Q9H7S9 590 aaPredicted RBP4.56□□□□□ -1.68
CD44-202ENST00000278385 GPR35Q9HC97 309 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 RAB20Q9NX57 234 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 P4HTMQ9NXG6 502 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 CRNNQ9UBG3 495 aaPredicted RBP4.56□□□□□ -1.68
CD44-202ENST00000278385 DNAJB11Q9UBS4 358 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 ATP6V1HQ9UI12 483 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 SNX6Q9UNH7 406 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 FZD1Q9UP38 647 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 ACTL7AQ9Y615 435 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 RAD54BQ9Y620 910 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 SPACA6W5XKT8 324 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 PAPPA2Q9BXP8 1791 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 SCN9AQ15858 1988 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 ELOVL7A1L3X0 281 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 MFSD2BA6NFX1 497 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 FAM47DPA6NHR8 397 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 F8WDY8 70 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 H0Y8G0 127 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 CLIC2O15247 247 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 EIF3DO15371 548 aaKnown RBP eCLIP4.55□□□□□ -1.68
CD44-202ENST00000278385 CLDN3O15551 220 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 FLOT1O75955 427 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 VNN2O95498 520 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 POP4O95707 220 aaKnown RBP4.55□□□□□ -1.68
CD44-202ENST00000278385 BAG3O95817 575 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 SERPINC1P01008 464 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 ADH4P08319 380 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 UBTFL6P0CB48 400 aaPredicted RBP4.55□□□□□ -1.68
CD44-202ENST00000278385 PIM1P11309 404 aaPredicted RBP4.55□□□□□ -1.68
CD44-202ENST00000278385 CETPP11597 493 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 CYP2C9P11712 490 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 ANXA8P13928 327 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 CCDC130P13994 396 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 ADRA2CP18825 462 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 CHRM3P20309 590 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 TACR2P21452 398 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 HNRNPA2B1P22626 353 aaKnown RBP4.55□□□□□ -1.68
CD44-202ENST00000278385 KCNJ1P48048 391 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 RGS19P49795 217 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 CLCNKBP51801 687 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 NAGLUP54802 743 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 CARD18P57730 90 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 ZXDAP98168 799 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 EFNB1P98172 346 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 SPIBQ01892 262 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 GCNT1Q02742 428 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 TCP10Q12799 353 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 OVGP1Q12889 678 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms