RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 IL12RB2Q99665 862 aa11.14□□□□□ -0.63
USP6NL-201ENST00000277575 ADAMTS10Q9H324 1103 aa11.14□□□□□ -0.63
USP6NL-201ENST00000277575 POLR1BQ9H9Y6 1135 aa11.14□□□□□ -0.63
USP6NL-201ENST00000277575 TLR9Q9NR96 1032 aa11.14□□□□□ -0.63
USP6NL-201ENST00000277575 CDH22Q9UJ99 828 aa11.14□□□□□ -0.63
USP6NL-201ENST00000277575 CNOT6Q9ULM6 557 aaKnown RBP11.14□□□□□ -0.63
USP6NL-201ENST00000277575 SH3GLB1Q9Y371 365 aa11.14□□□□□ -0.63
USP6NL-201ENST00000277575 FPGTO14772 594 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 INPPL1O15357 1258 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 SHOX2O60902 331 aaPredicted RBP11.13□□□□□ -0.63
USP6NL-201ENST00000277575 PGM3O95394 542 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 ADH5P11766 374 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 RFC2P35250 354 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 CCNHP51946 323 aaPredicted RBP11.13□□□□□ -0.63
USP6NL-201ENST00000277575 ITGA1P56199 1179 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 BROXQ5VW32 411 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 BRAT1Q6PJG6 821 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 GRASPQ7Z6J2 395 aaPredicted RBP11.13□□□□□ -0.63
USP6NL-201ENST00000277575 CELF5Q8N6W0 485 aaKnown RBP11.13□□□□□ -0.63
USP6NL-201ENST00000277575 ZNF540Q8NDQ6 660 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 BPIFB1Q8TDL5 484 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 LMLNQ96KR4 655 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 FIZ1Q96SL8 496 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 TDRD1Q9BXT4 1180 aaKnown RBP11.13□□□□□ -0.63
USP6NL-201ENST00000277575 BRINP2Q9C0B6 783 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 C1orf109Q9NX04 203 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 MFHAS1Q9Y4C4 1052 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 AP4B1Q9Y6B7 739 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 TOPAZ1Q8N9V7 1692 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 ELOVL7A1L3X0 281 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 K7EPI3 171 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 IL6P05231 212 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 PFKMP08237 780 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 SLC35G6P0C7Q6 338 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 ZNF37AP17032 561 aaPredicted RBP11.13□□□□□ -0.63
USP6NL-201ENST00000277575 HOXB6P17509 224 aaKnown RBP11.13□□□□□ -0.63
USP6NL-201ENST00000277575 DDX6P26196 483 aaKnown RBP eCLIP11.13□□□□□ -0.632e-6■■□□□ 13.3
USP6NL-201ENST00000277575 PNLIPRP1P54315 467 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 LIPEQ05469 1076 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 SERINC3Q13530 473 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 NAPRTQ6XQN6 538 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 PIWIL1Q96J94 861 aaKnown RBP11.13□□□□□ -0.63
USP6NL-201ENST00000277575 MPP4Q96JB8 637 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 C12orf66Q96MD2 445 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 NUSAP1Q9BXS6 441 aaKnown RBP11.13□□□□□ -0.63
USP6NL-201ENST00000277575 NUAK2Q9H093 628 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 ZDHHC3Q9NYG2 299 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 GSTK1Q9Y2Q3 226 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 IGKV6D-21A0A0A0MT36 114 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 CHRNGP07510 517 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 ITPKBP27987 946 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 IDH3AP50213 366 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 ZNF33AQ06730 810 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 TRAF3Q13114 568 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 UBXN2BQ14CS0 331 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 C16orf72Q14CZ0 275 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 DGUOKQ16854 277 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 CRYGNQ8WXF5 182 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 SLC47A1Q96FL8 570 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 RIOK2Q9BVS4 552 aaKnown RBP11.13□□□□□ -0.63
USP6NL-201ENST00000277575 TRMT61BQ9BVS5 477 aaKnown RBP11.13□□□□□ -0.63
USP6NL-201ENST00000277575 SLITRK2Q9H156 845 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 RNF186Q9NXI6 227 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 STMN3Q9NZ72 180 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 MAT2BQ9NZL9 334 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 TEX264Q9Y6I9 313 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 ADAMTSL3P82987 1691 aa11.13□□□□□ -0.63
USP6NL-201ENST00000277575 PNMA8CA0A1B0GUJ8 204 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 LRRC14BA6NHZ5 514 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 FAM159BA6NKW6 160 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 SCN2BO60939 215 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 MTX2O75431 263 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 SLC25A12O75746 678 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 ACTR1BP42025 376 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 ACTR1AP61163 376 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 IRF9Q00978 393 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 CHRNA6Q15825 494 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 NDUFA9Q16795 377 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 MTX3Q5HYI7 312 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 ANKRD46Q86W74 232 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 SMYD1Q8NB12 490 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 C11orf65Q8NCR3 313 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 OR2T34Q8NGX1 318 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 OR2T3Q8NH03 318 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 POF1BQ8WVV4 589 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 PYCR2Q96C36 320 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 PRICKLE1Q96MT3 831 aaPredicted RBP11.12□□□□□ -0.63
USP6NL-201ENST00000277575 GPR62Q9BZJ7 368 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 ZNF865P0CJ78 1059 aaPredicted RBP11.12□□□□□ -0.63
USP6NL-201ENST00000277575 PCSK2P16519 638 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 PDZK1Q5T2W1 519 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 NAIF1Q69YI7 327 aaPredicted RBP11.12□□□□□ -0.63
USP6NL-201ENST00000277575 PAOXQ6QHF9 649 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 DCAF4L2Q8NA75 395 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 SMG8Q8ND04 991 aaKnown RBP11.12□□□□□ -0.63
USP6NL-201ENST00000277575 DCAKDQ8WVC6 231 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 SIPA1Q96FS4 1042 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 MTERF1Q99551 399 aaKnown RBP11.12□□□□□ -0.63
USP6NL-201ENST00000277575 PTPN18Q99952 460 aa11.12□□□□□ -0.63
USP6NL-201ENST00000277575 FANCEQ9HB96 536 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms