RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 MRPS6P82932 125 aaKnown RBP27.13■■□□□ 1.93
CBX4-201ENST00000269397 CCL15Q16663 113 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 TYSND1Q2T9J0 566 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 RBM48Q5RL73 367 aaKnown RBP27.13■■□□□ 1.93
CBX4-201ENST00000269397 PARP8Q8N3A8 854 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 TAMM41Q96BW9 452 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 SDCCAG3Q96C92 435 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 ITCHQ96J02 903 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 COMMD8Q9NX08 183 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 POLR3HQ9Y535 204 aaPredicted RBP27.13■■□□□ 1.93
CBX4-201ENST00000269397 MYO16Q9Y6X6 1858 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 GNGT2O14610 69 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 TSPAN3O60637 253 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 MLYCDO95822 493 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 GGT1P19440 569 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 HLA-DPA1P20036 260 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 NRG1Q02297 640 aaPredicted RBP27.13■■□□□ 1.93
CBX4-201ENST00000269397 KCNAB2Q13303 367 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 SPIDRQ14159 915 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 OR10A6Q8NH74 314 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 ZNF583Q96ND8 569 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 ZBED2Q9BTP6 218 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 M0QZ92 97 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 E2F3O00716 465 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 CAPN1P07384 714 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 FSHRP23945 695 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 GRK4P32298 578 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 PTPRRQ15256 657 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 CYP20A1Q6UW02 462 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 THEM5Q8N1Q8 247 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 METTL6Q8TCB7 284 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 RMDN1Q96DB5 314 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 SH3YL1Q96HL8 342 aaPredicted RBP27.13■■□□□ 1.93
CBX4-201ENST00000269397 NSMCE3Q96MG7 304 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 U3KQV3 271 aa27.13■■□□□ 1.93
CBX4-201ENST00000269397 TBC1D4O60343 1298 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 CNPP09543 421 aaKnown RBP27.12■■□□□ 1.93
CBX4-201ENST00000269397 GGT5P36269 586 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 LSM3P62310 102 aaKnown RBP27.12■■□□□ 1.93
CBX4-201ENST00000269397 KCNC4Q03721 635 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 NR6A1Q15406 480 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 LAIR2Q6ISS4 152 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 PIANPQ8IYJ0 282 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 HDAC2Q92769 488 aaKnown RBP27.12■■□□□ 1.93
CBX4-201ENST00000269397 TDRD1Q9BXT4 1180 aaKnown RBP27.12■■□□□ 1.93
CBX4-201ENST00000269397 PCDH12Q9NPG4 1184 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 GIT1Q9Y2X7 761 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 TRIM17Q9Y577 477 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 KRBA1A5PL33 1030 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 TMEM247A6NEH6 219 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 GSTA4O15217 222 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 CYP11A1P05108 521 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 JAK1P23458 1154 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 ALDH4A1P30038 563 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 SERINC3Q13530 473 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 GPSM1Q86YR5 675 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 OR10Q1Q8NGQ4 319 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 FRS2Q8WU20 508 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 LINGO1Q96FE5 620 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 THUMPD3Q9BV44 507 aaKnown RBP27.12■■□□□ 1.93
CBX4-201ENST00000269397 IKZF5Q9H5V7 419 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 PAK1IP1Q9NWT1 392 aaPredicted RBP27.12■■□□□ 1.93
CBX4-201ENST00000269397 ADGRE2Q9UHX3 823 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 NEUROG3Q9Y4Z2 214 aa27.12■■□□□ 1.93
CBX4-201ENST00000269397 PTPRDP23468 1912 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 IQCF5A8MTL0 148 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 GMNNO75496 209 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 PBX3P40426 434 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 IL10RBQ08334 325 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 RFTN2Q52LD8 501 aaPredicted RBP27.11■■□□□ 1.93
CBX4-201ENST00000269397 TTC23Q5W5X9 447 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 CFAP52Q8N1V2 620 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 DPP10Q8N608 796 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 KLHDC9Q8NEP7 349 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 ZNF555Q8NEP9 628 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 GTF3C2Q8WUA4 911 aaPredicted RBP27.11■■□□□ 1.93
CBX4-201ENST00000269397 AASSQ9UDR5 926 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 SEPT3Q9UH03 358 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 STX16O14662 325 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 GPR39O43194 453 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 HS6ST1O60243 411 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 TSPAN12O95859 305 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 EIF2B2P49770 351 aaKnown RBP27.11■■□□□ 1.93
CBX4-201ENST00000269397 KPNA1P52294 538 aaPredicted RBP27.11■■□□□ 1.93
CBX4-201ENST00000269397 CCL14Q16627 93 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 PSAPL1Q6NUJ1 521 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 OR2T12Q8NG77 320 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 AURKBQ96GD4 344 aaPredicted RBP27.11■■□□□ 1.93
CBX4-201ENST00000269397 SMPD4Q9NXE4 827 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 CPQQ9Y646 472 aa27.11■■□□□ 1.93
CBX4-201ENST00000269397 C16orf96A6NNT2 1141 aa27.1■■□□□ 1.93
CBX4-201ENST00000269397 PTGR1Q14914 329 aa27.1■■□□□ 1.93
CBX4-201ENST00000269397 TMEM179BQ7Z7N9 219 aa27.1■■□□□ 1.93
CBX4-201ENST00000269397 BRI3BPQ8WY22 251 aa27.1■■□□□ 1.93
CBX4-201ENST00000269397 BPIFA1Q9NP55 256 aa27.1■■□□□ 1.93
CBX4-201ENST00000269397 INVSQ9Y283 1065 aa27.1■■□□□ 1.93
CBX4-201ENST00000269397 A0A0D9SEW6 157 aa27.1■■□□□ 1.93
CBX4-201ENST00000269397 XPNPEP2O43895 674 aa27.1■■□□□ 1.93
CBX4-201ENST00000269397 CHRNA1P02708 482 aa27.1■■□□□ 1.93
CBX4-201ENST00000269397 PIK3CGP48736 1102 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms