RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 TMCC3Q9ULS5 477 aa13.79□□□□□ -0.2
LIMD2-201ENST00000259006 LINC01387J3KSC0 135 aa13.79□□□□□ -0.2
LIMD2-201ENST00000259006 GJB3O75712 270 aa13.79□□□□□ -0.2
LIMD2-201ENST00000259006 LDLRP01130 860 aa13.79□□□□□ -0.2
LIMD2-201ENST00000259006 TCF3P15923 654 aa13.79□□□□□ -0.2
LIMD2-201ENST00000259006 CENPAP49450 140 aa13.79□□□□□ -0.2
LIMD2-201ENST00000259006 YWHAHQ04917 246 aaPredicted RBP13.79□□□□□ -0.2
LIMD2-201ENST00000259006 AQP6Q13520 282 aa13.79□□□□□ -0.2
LIMD2-201ENST00000259006 DGCR6Q14129 220 aa13.79□□□□□ -0.2
LIMD2-201ENST00000259006 METTL3Q86U44 580 aaKnown RBP13.79□□□□□ -0.2
LIMD2-201ENST00000259006 UNC93AQ86WB7 457 aa13.79□□□□□ -0.2
LIMD2-201ENST00000259006 FAM9CQ8IZT9 166 aa13.79□□□□□ -0.2
LIMD2-201ENST00000259006 TRPV3Q8NET8 790 aa13.79□□□□□ -0.2
LIMD2-201ENST00000259006 RCOR3Q9P2K3 495 aaPredicted RBP13.79□□□□□ -0.2
LIMD2-201ENST00000259006 FAM50BQ9Y247 325 aa13.79□□□□□ -0.2
LIMD2-201ENST00000259006 MAN2B2Q9Y2E5 1009 aa13.79□□□□□ -0.2
LIMD2-201ENST00000259006 TCAF1Q9Y4C2 921 aa13.79□□□□□ -0.2
LIMD2-201ENST00000259006 PDZK1P1A8MUH7 402 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 H3BRB1 525 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 FXYD1O00168 92 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 TBX1O43435 398 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 HLA-DQB2P05538 268 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 ATF6P18850 670 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 AGXTP21549 392 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 PRDX3P30048 256 aaKnown RBP13.78□□□□□ -0.2
LIMD2-201ENST00000259006 ARSDP51689 593 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 MTPNP58546 118 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 TTLL4Q14679 1199 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 R3HCC1LQ7Z5L2 792 aaKnown RBP13.78□□□□□ -0.2
LIMD2-201ENST00000259006 ADAMTSL2Q86TH1 951 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 RIOX2Q8IUF8 465 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 FBXO30Q8TB52 745 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 SLC39A13Q96H72 371 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 TNIP3Q96KP6 325 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 UBA6A0AVT1 1052 aaPredicted RBP13.78□□□□□ -0.2
LIMD2-201ENST00000259006 MEIS3P2A8K0S8 358 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 H0YJX3 145 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 GSNP06396 782 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 HAAOP46952 286 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 UFM1P61960 85 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 CCNA1P78396 465 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 TRIM32Q13049 653 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 ZMYND11Q15326 602 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 ATP6AP1Q15904 470 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 UNC50Q53HI1 259 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 DENND5AQ6IQ26 1287 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 FAM45BPQ6NSW5 357 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 CELF2-AS1Q8N7Q2 184 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 SLC22A8Q8TCC7 542 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 FAM45AQ8TCE6 357 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 HASPINQ8TF76 798 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 ST8SIA2Q92186 375 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 SLC30A3Q99726 388 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 TMEM9Q9P0T7 183 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 TEKT2Q9UIF3 430 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 ANAPC2Q9UJX6 822 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 FBXW11Q9UKB1 542 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 TRHDEQ9UKU6 1024 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 PHIPQ8WWQ0 1821 aa13.78□□□□□ -0.2
LIMD2-201ENST00000259006 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.77□□□□□ -0.2
LIMD2-201ENST00000259006 CDK14O94921 469 aa13.77□□□□□ -0.2
LIMD2-201ENST00000259006 TRIM16O95361 564 aa13.77□□□□□ -0.2
LIMD2-201ENST00000259006 TAF6P49848 677 aa13.77□□□□□ -0.2
LIMD2-201ENST00000259006 AFF1P51825 1210 aaKnown RBP13.77□□□□□ -0.2
LIMD2-201ENST00000259006 OR4D2P58180 307 aa13.77□□□□□ -0.2
LIMD2-201ENST00000259006 LAPTM4AQ15012 233 aa13.77□□□□□ -0.2
LIMD2-201ENST00000259006 TMEM236Q5W0B7 351 aa13.77□□□□□ -0.2
LIMD2-201ENST00000259006 ZNF600Q6ZNG1 722 aa13.77□□□□□ -0.2
LIMD2-201ENST00000259006 USP50Q70EL3 339 aaPredicted RBP13.77□□□□□ -0.2
LIMD2-201ENST00000259006 CRYBG2Q8N1P7 616 aa13.77□□□□□ -0.2
LIMD2-201ENST00000259006 PDPRQ8NCN5 879 aa13.77□□□□□ -0.2
LIMD2-201ENST00000259006 ELMO1Q92556 727 aa13.77□□□□□ -0.2
LIMD2-201ENST00000259006 UHRF1Q96T88 793 aaPredicted RBP13.77□□□□□ -0.2
LIMD2-201ENST00000259006 TRIM15Q9C019 465 aa13.77□□□□□ -0.2
LIMD2-201ENST00000259006 SLC39A8Q9C0K1 460 aa13.77□□□□□ -0.2
LIMD2-201ENST00000259006 NT5MQ9NPB1 228 aa13.77□□□□□ -0.2
LIMD2-201ENST00000259006 NMRK2Q9NPI5 230 aa13.77□□□□□ -0.2
LIMD2-201ENST00000259006 PNMA8BQ9ULN7 279 aaPredicted RBP13.77□□□□□ -0.2
LIMD2-201ENST00000259006 VWA7Q9Y334 891 aa13.77□□□□□ -0.2
LIMD2-201ENST00000259006 LAMA3Q16787 3333 aa13.77□□□□□ -0.2
LIMD2-201ENST00000259006 FAM155AB1AL88 458 aaPredicted RBP13.77□□□□□ -0.21
LIMD2-201ENST00000259006 CPNE3O75131 537 aaKnown RBP13.77□□□□□ -0.21
LIMD2-201ENST00000259006 NRG1Q02297 640 aaPredicted RBP13.77□□□□□ -0.21
LIMD2-201ENST00000259006 DBPQ10586 325 aaPredicted RBP13.77□□□□□ -0.21
LIMD2-201ENST00000259006 CRTC3Q6UUV7 619 aa13.77□□□□□ -0.21
LIMD2-201ENST00000259006 LINC00523Q86TU6 105 aa13.77□□□□□ -0.21
LIMD2-201ENST00000259006 GRPEL2Q8TAA5 225 aa13.77□□□□□ -0.21
LIMD2-201ENST00000259006 SNAPC3Q92966 411 aa13.77□□□□□ -0.21
LIMD2-201ENST00000259006 MARC2Q969Z3 335 aa13.77□□□□□ -0.21
LIMD2-201ENST00000259006 BIRC7Q96CA5 298 aa13.77□□□□□ -0.21
LIMD2-201ENST00000259006 MYRFLQ96LU7 910 aa13.77□□□□□ -0.21
LIMD2-201ENST00000259006 CDK15Q96Q40 435 aa13.77□□□□□ -0.21
LIMD2-201ENST00000259006 TUBB1Q9H4B7 451 aa13.77□□□□□ -0.21
LIMD2-201ENST00000259006 NTN4Q9HB63 628 aa13.77□□□□□ -0.21
LIMD2-201ENST00000259006 GLOD4Q9HC38 313 aa13.77□□□□□ -0.21
LIMD2-201ENST00000259006 NSMCE4AQ9NXX6 385 aa13.77□□□□□ -0.21
LIMD2-201ENST00000259006 UTS2RQ9UKP6 389 aa13.77□□□□□ -0.21
LIMD2-201ENST00000259006 PPP2R3BQ9Y5P8 575 aa13.77□□□□□ -0.21
LIMD2-201ENST00000259006 SLC9A3R1O14745 358 aaPredicted RBP13.77□□□□□ -0.21
LIMD2-201ENST00000259006 CNTN5O94779 1100 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms