RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 IRS1P35568 1242 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 STAT5AP42229 794 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 CCT3P49368 545 aaKnown RBP7.66□□□□□ -1.18
GPNMB-201ENST00000258733 ATXN3P54252 364 aaPredicted RBP7.66□□□□□ -1.18
GPNMB-201ENST00000258733 OR2B6P58173 313 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 MMRN1Q13201 1228 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 DDX39BQ13838 428 aaKnown RBP7.66□□□□□ -1.18
GPNMB-201ENST00000258733 GRIN2CQ14957 1233 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 HLFQ16534 295 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 ECM1Q16610 540 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 HFEQ30201 348 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 C10orf120Q5SQS8 335 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 SLC30A6Q6NXT4 461 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 SLCO6A1Q86UG4 719 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 GPIHBP1Q8IV16 184 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 CTAGE3PQ8IX95 158 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 PLA2G15Q8NCC3 412 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 OR9A2Q8NGT5 310 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 OR14C36Q8NHC7 312 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.66□□□□□ -1.18
GPNMB-201ENST00000258733 C2orf40Q9H1Z8 148 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 KAT8Q9H7Z6 458 aaKnown RBP7.66□□□□□ -1.18
GPNMB-201ENST00000258733 CYP3A43Q9HB55 503 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 PCDH9Q9HC56 1237 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 SDHAF2Q9NX18 166 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 OBP2AQ9NY56 170 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 TMEM59LQ9UK28 342 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 RUVBL2Q9Y230 463 aaKnown RBP7.66□□□□□ -1.18
GPNMB-201ENST00000258733 AKT3Q9Y243 479 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 KCNK7Q9Y2U2 307 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 IGSF1Q8N6C5 1336 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 SALL1Q9NSC2 1324 aa7.66□□□□□ -1.18
GPNMB-201ENST00000258733 GRM8O00222 908 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 TO15178 435 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 PSTPIP1O43586 416 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 EDF1O60869 148 aaKnown RBP7.65□□□□□ -1.18
GPNMB-201ENST00000258733 TXNP10599 105 aaKnown RBP7.65□□□□□ -1.18
GPNMB-201ENST00000258733 OR1E1P30953 314 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 CSNK1DP48730 415 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 STAT5BP51692 787 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 TMBIM6P55061 237 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 SKP1P63208 163 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 PURAQ00577 322 aaKnown RBP7.65□□□□□ -1.18
GPNMB-201ENST00000258733 ZP2Q05996 745 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 SOX4Q06945 474 aaPredicted RBP7.65□□□□□ -1.18
GPNMB-201ENST00000258733 PRKAA1Q13131 559 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 RAB39AQ14964 217 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 ZNHIT3Q15649 155 aaPredicted RBP7.65□□□□□ -1.18
GPNMB-201ENST00000258733 CCNYL2Q5T2Q4 361 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 KRT80Q6KB66 452 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 WDR59Q6PJI9 974 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 RRM2BQ7LG56 351 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 TGIF2LXQ8IUE1 241 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 MAP4K3Q8IVH8 894 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 WDSUB1Q8N9V3 476 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 BEST2Q8NFU1 509 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 ST7LQ8TDW4 575 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 IGDCC4Q8TDY8 1250 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 ADAMTS18Q8TE60 1221 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 TMEM41AQ96HV5 264 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 MEGF10Q96KG7 1140 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 KLF6Q99612 283 aaPredicted RBP7.65□□□□□ -1.18
GPNMB-201ENST00000258733 POTEKPQ9BYX7 375 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 CPEB1Q9BZB8 566 aaKnown RBP7.65□□□□□ -1.18
GPNMB-201ENST00000258733 MINDY3Q9H8M7 445 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 IL1RAPQ9NPH3 570 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 TDP1Q9NUW8 608 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 ERAP1Q9NZ08 941 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 LRWD1Q9UFC0 647 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 PLA2G4CQ9UP65 541 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 MMACHCQ9Y4U1 282 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 TNKSO95271 1327 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 BLACEA4D250 179 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 METTL15A6NJ78 407 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 RFPL4AA6NLU0 287 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 RFPL4AL1F8VTS6 287 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 WWP2O00308 870 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 CDC7O00311 574 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 SLC30A4O14863 429 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 GSTA4O15217 222 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 CRCPO75575 148 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 MOCS2O96007 188 aaPredicted RBP7.65□□□□□ -1.18
GPNMB-201ENST00000258733 PLATP00750 562 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 CSTAP01040 98 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 BRAFP15056 766 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 YBX3P16989 372 aaKnown RBP eCLIP7.65□□□□□ -1.18
GPNMB-201ENST00000258733 XRCC1P18887 633 aaPredicted RBP7.65□□□□□ -1.18
GPNMB-201ENST00000258733 IGFBP5P24593 272 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 IL1R2P27930 398 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 ACADLP28330 430 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 CD40LGP29965 261 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 RFC2P35250 354 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 CDKL1Q00532 357 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 MPP2Q14168 576 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 AKIRIN2Q53H80 203 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 ELP2Q6IA86 826 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 OR5M10Q6IEU7 315 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 SLC27A4Q6P1M0 643 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 C1orf94Q6P1W5 598 aa7.65□□□□□ -1.18
GPNMB-201ENST00000258733 LAYNQ6UX15 382 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms