RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 SPATA21Q7Z572 469 aa18.28■□□□□ 0.52
SNX17-201ENST00000233575 SYNPOQ8N3V7 929 aa18.28■□□□□ 0.52
SNX17-201ENST00000233575 CCNYL1Q8N7R7 359 aa18.28■□□□□ 0.52
SNX17-201ENST00000233575 POLMQ9NP87 494 aaPredicted RBP18.28■□□□□ 0.52
SNX17-201ENST00000233575 GULP1Q9UBP9 304 aa18.28■□□□□ 0.52
SNX17-201ENST00000233575 CDYLQ9Y232 598 aa18.28■□□□□ 0.52
SNX17-201ENST00000233575 MRPS17Q9Y2R5 130 aaKnown RBP18.28■□□□□ 0.52
SNX17-201ENST00000233575 ERICH4A6NGS2 130 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 LRRC14BA6NHZ5 514 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 SUPT3HB4E1H0 165 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 SUPT3HO75486 399 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 KITP10721 976 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 PBLDP30039 288 aaPredicted RBP18.27■□□□□ 0.52
SNX17-201ENST00000233575 RGS4P49798 205 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 GBX1Q14549 363 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 PFKFB4Q16877 469 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 ZNF547Q8IVP9 402 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 MYO1HQ8N1T3 1032 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 RFWD2Q8NHY2 731 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 DLG3Q92796 817 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 TBC1D17Q9HA65 648 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 CD320Q9NPF0 282 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 ITM2CQ9NQX7 267 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 MUTYHQ9UIF7 546 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 PRKAB1Q9Y478 270 aa18.27■□□□□ 0.52
SNX17-201ENST00000233575 F8W8V4 182 aa18.27■□□□□ 0.51
SNX17-201ENST00000233575 SIX3O95343 332 aaPredicted RBP18.27■□□□□ 0.51
SNX17-201ENST00000233575 FTH1P02794 183 aa18.27■□□□□ 0.51
SNX17-201ENST00000233575 IGFALSP35858 605 aa18.27■□□□□ 0.51
SNX17-201ENST00000233575 TTLL9Q3SXZ7 439 aa18.27■□□□□ 0.51
SNX17-201ENST00000233575 CRTC3Q6UUV7 619 aa18.27■□□□□ 0.51
SNX17-201ENST00000233575 TRAPPC5Q8IUR0 188 aa18.27■□□□□ 0.51
SNX17-201ENST00000233575 PTGR2Q8N8N7 351 aaPredicted RBP18.27■□□□□ 0.51
SNX17-201ENST00000233575 SHDQ96IW2 340 aa18.27■□□□□ 0.51
SNX17-201ENST00000233575 SHCBP1LQ9BZQ2 653 aa18.27■□□□□ 0.51
SNX17-201ENST00000233575 BTBD1Q9H0C5 482 aa18.27■□□□□ 0.51
SNX17-201ENST00000233575 USP36Q9P275 1121 aaKnown RBP18.27■□□□□ 0.51
SNX17-201ENST00000233575 ATG13O75143 517 aa18.26■□□□□ 0.51
SNX17-201ENST00000233575 TPBGLP0DKB5 382 aa18.26■□□□□ 0.51
SNX17-201ENST00000233575 DNAJB13P59910 316 aa18.26■□□□□ 0.51
SNX17-201ENST00000233575 MAP7D1Q3KQU3 841 aa18.26■□□□□ 0.51
SNX17-201ENST00000233575 LSMEM2Q8N112 164 aa18.26■□□□□ 0.51
SNX17-201ENST00000233575 FRMD1Q8N878 549 aa18.26■□□□□ 0.51
SNX17-201ENST00000233575 SREK1Q8WXA9 508 aaKnown RBP18.26■□□□□ 0.51
SNX17-201ENST00000233575 TEX101Q9BY14 249 aa18.26■□□□□ 0.51
SNX17-201ENST00000233575 KLHL42Q9P2K6 505 aa18.26■□□□□ 0.51
SNX17-201ENST00000233575 DCTN4Q9UJW0 460 aa18.26■□□□□ 0.51
SNX17-201ENST00000233575 SMIM24O75264 130 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 GFAPP14136 432 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 TRIM23P36406 574 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 PREPP48147 710 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 PHKG1Q16816 387 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 PPP1R3AQ16821 1122 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 PLA2G4EQ3MJ16 856 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 FAM219BQ5XKK7 198 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 GPSM1Q86YR5 675 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 TSTD1Q8NFU3 115 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 CCM2Q9BSQ5 444 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 ZCCHC2Q9C0B9 1178 aaKnown RBP18.25■□□□□ 0.51
SNX17-201ENST00000233575 DRC3Q9H069 523 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 WDR26Q9H7D7 661 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 PNPOQ9NVS9 261 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 CYP8B1Q9UNU6 501 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 CA5BQ9Y2D0 317 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 DNAJC16Q9Y2G8 782 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 GPC4O75487 556 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 NFKB2Q00653 900 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 RCN2Q14257 317 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 TGFBIQ15582 683 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 ZNF658BQ4V348 819 aaPredicted RBP18.25■□□□□ 0.51
SNX17-201ENST00000233575 BCL7AQ4VC05 210 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 ARL13AQ5H913 290 aaPredicted RBP18.25■□□□□ 0.51
SNX17-201ENST00000233575 NEK5Q6P3R8 708 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 XKR5Q6UX68 686 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 CRLF3Q8IUI8 442 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 SLC22A9Q8IVM8 553 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 CACNA2D3Q8IZS8 1091 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 ZNF781Q8N8C0 355 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 AGR3Q8TD06 166 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 ESAMQ96AP7 390 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 GRAMD1AQ96CP6 724 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 CCDC126Q96EE4 140 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 TPSD1Q9BZJ3 242 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 USP34Q70CQ2 3546 aa18.25■□□□□ 0.51
SNX17-201ENST00000233575 TMEM114B3SHH9 223 aa18.24■□□□□ 0.51
SNX17-201ENST00000233575 QSOX1O00391 747 aa18.24■□□□□ 0.51
SNX17-201ENST00000233575 STK25O00506 426 aa18.24■□□□□ 0.51
SNX17-201ENST00000233575 NUAK1O60285 661 aa18.24■□□□□ 0.51
SNX17-201ENST00000233575 H2AFYO75367 372 aaKnown RBP18.24■□□□□ 0.51
SNX17-201ENST00000233575 HSPA4LO95757 839 aa18.24■□□□□ 0.51
SNX17-201ENST00000233575 CBSLP0DN79 551 aa18.24■□□□□ 0.51
SNX17-201ENST00000233575 TSPAN8P19075 237 aa18.24■□□□□ 0.51
SNX17-201ENST00000233575 IMPDH1P20839 514 aa18.24■□□□□ 0.51
SNX17-201ENST00000233575 CBSP35520 551 aa18.24■□□□□ 0.51
SNX17-201ENST00000233575 PXNP49023 591 aaPredicted RBP18.24■□□□□ 0.51
SNX17-201ENST00000233575 AGTR2P50052 363 aa18.24■□□□□ 0.51
SNX17-201ENST00000233575 CLDN2P57739 230 aa18.24■□□□□ 0.51
SNX17-201ENST00000233575 PLEKHS1Q5SXH7 462 aa18.24■□□□□ 0.51
SNX17-201ENST00000233575 ZNF678Q5SXM1 525 aa18.24■□□□□ 0.51
SNX17-201ENST00000233575 ZNF771Q7L3S4 317 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms