RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 TESMINQ9Y4I5 508 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 NRXN3Q9Y4C0 1643 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 LMO7Q8WWI1 1683 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 KPNA5O15131 536 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 PKMP14618 531 aaKnown RBP13.64□□□□□ -0.23
HCFC2-201ENST00000229330 CD72P21854 359 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 PTX3P26022 381 aaPredicted RBP13.64□□□□□ -0.23
HCFC2-201ENST00000229330 ELK4P28324 431 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 TMEM236Q5W0B7 351 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 RAP1GAP2Q684P5 730 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 MTSS1LQ765P7 747 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 IGDCC3Q8IVU1 814 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 SOCS4Q8WXH5 440 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 EFHD2Q96C19 240 aaPredicted RBP13.64□□□□□ -0.23
HCFC2-201ENST00000229330 TCF25Q9BQ70 676 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 BCAS3Q9H6U6 928 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 IPPKQ9H8X2 491 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 COMMD3Q9UBI1 195 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 H0YAE9 185 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 DLX3O60479 287 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 OXSR1O95747 527 aaPredicted RBP13.64□□□□□ -0.23
HCFC2-201ENST00000229330 TRBC1P01850 177 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 CDH12P55289 794 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 CYP2A13Q16696 494 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 ZC3H3Q8IXZ2 948 aaKnown RBP13.64□□□□□ -0.23
HCFC2-201ENST00000229330 TBATAQ96M53 351 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 SLC30A2Q9BRI3 323 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 TMEM246Q9BRR3 403 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 OAS3Q9Y6K5 1087 aaKnown RBP13.64□□□□□ -0.23
HCFC2-201ENST00000229330 POMCP01189 267 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 PRKAG1P54619 331 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 MYBPC1Q00872 1141 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 TBRG1Q3YBR2 411 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 PLEKHG4Q58EX7 1191 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 DCLRE1AQ6PJP8 1040 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 LRRC52Q8N7C0 313 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 MOSPD2Q8NHP6 518 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 SPATA22Q8NHS9 363 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 BIRC7Q96CA5 298 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 FRMD6Q96NE9 622 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 MNTQ99583 582 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 ABCG2Q9UNQ0 655 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 HSPB11Q9Y547 144 aa13.64□□□□□ -0.23
HCFC2-201ENST00000229330 RGPD8O14715 1765 aaPredicted RBP13.63□□□□□ -0.23
HCFC2-201ENST00000229330 UGT2B17O75795 530 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 DNAJB5O75953 348 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 ERVK-8P63133 956 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 GNA13Q14344 377 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 HSDL1Q3SXM5 330 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 CRTC2Q53ET0 693 aaPredicted RBP13.63□□□□□ -0.23
HCFC2-201ENST00000229330 ZNF613Q6PF04 617 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 MOB2Q70IA6 237 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 SLC15A4Q8N697 577 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 PAK6Q9NQU5 681 aaPredicted RBP13.63□□□□□ -0.23
HCFC2-201ENST00000229330 NUDT4Q9NZJ9 180 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 CLDN5O00501 218 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 BMP7P18075 431 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 TNNI3P19429 210 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 NTSP30990 170 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 SLC1A2P43004 574 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 GPD2P43304 727 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 OMPP47874 163 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 GLUD2P49448 558 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 SMARCB1Q12824 385 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 FAM20CQ8IXL6 584 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 SCML4Q8N228 414 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 LIX1Q8N485 282 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 GLB1L3Q8NCI6 653 aaPredicted RBP13.63□□□□□ -0.23
HCFC2-201ENST00000229330 EMID1Q96A84 441 aaPredicted RBP13.63□□□□□ -0.23
HCFC2-201ENST00000229330 MUS81Q96NY9 551 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 KLHL5Q96PQ7 755 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 GPR21Q99679 349 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 PARP4Q9UKK3 1724 aaKnown RBP13.63□□□□□ -0.23
HCFC2-201ENST00000229330 A8MV72 311 aaPredicted RBP13.63□□□□□ -0.23
HCFC2-201ENST00000229330 C7P10643 843 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 AFDNP55196 1824 aaKnown RBP13.63□□□□□ -0.23
HCFC2-201ENST00000229330 FAM174BQ3ZCQ3 159 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 SPATS1Q496A3 300 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 XKRXQ6PP77 449 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 YAF2Q8IY57 180 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 TMPRSS4Q9NRS4 437 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 MARCH2Q9P0N8 246 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 A0A0G2JPF8 293 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 A8MX80 341 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 HNRNPCL3B7ZW38 293 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 HOXA2O43364 376 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 CCNB2O95067 398 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 HNRNPCL4P0DMR1 293 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 CCNCP24863 283 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 HERVK_113P63132 956 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 SH3PXD2AQ5TCZ1 1133 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 ZNF280DQ6N043 979 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 CXorf57Q6NSI4 855 aaKnown RBP13.63□□□□□ -0.23
HCFC2-201ENST00000229330 CHST15Q7LFX5 561 aaPredicted RBP13.63□□□□□ -0.23
HCFC2-201ENST00000229330 COLGALT2Q8IYK4 626 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 C11orf65Q8NCR3 313 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 GTPBP3Q969Y2 492 aaKnown RBP13.63□□□□□ -0.23
HCFC2-201ENST00000229330 KLRG1Q96E93 195 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 ERVK-6Q9BXR3 956 aa13.63□□□□□ -0.23
HCFC2-201ENST00000229330 CNTN3Q9P232 1028 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms