RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 DUSP6Q16828 381 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 IL31Q6EBC2 164 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 ELMSAN1Q6PJG2 1045 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 SPPL2CQ8IUH8 684 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 STK40Q8N2I9 435 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 SNX31Q8N9S9 440 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 LEMD2Q8NC56 503 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 KCNJ9Q92806 393 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 TIFAQ96CG3 184 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 PDLIM5Q96HC4 596 aaKnown RBP24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 GPR21Q99679 349 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 TDRD1Q9BXT4 1180 aaKnown RBP24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 CAAP1Q9H8G2 361 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 SCUBE2Q9NQ36 999 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 SUN2Q9UH99 717 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 SPO11Q9Y5K1 396 aa24.59■■□□□ 1.53
RUNDC3A-201ENST00000225441 A0A1W2PRU2 124 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 XYLBO75191 536 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 CKMT2P17540 419 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 PTPN2P17706 415 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 PTPRNQ16849 979 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 GALNT13Q8IUC8 556 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 DPP10Q8N608 796 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 ARL14EPQ8N8R7 260 aaPredicted RBP24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 RMDN1Q96DB5 314 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 BIRC8Q96P09 236 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 SLC22A12Q96S37 553 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 HGH1Q9BTY7 390 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 ALG2Q9H553 416 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 SEMA4BQ9NPR2 832 aaPredicted RBP24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 GKN1Q9NS71 199 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 NUDT4Q9NZJ9 180 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 AURKCQ9UQB9 309 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 CCDC154A6NI56 674 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 STC2O76061 302 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 FGF19O95750 216 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 TTKP33981 857 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 NRIP1P48552 1158 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 GSK3BP49841 420 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 ESRRGP62508 458 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 MERTKQ12866 999 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 PITRM1Q5JRX3 1037 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 GPRIN3Q6ZVF9 776 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 FKBP9P1Q75LS8 142 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 SYVN1Q86TM6 617 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 GPSM1Q86YR5 675 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 CBR4Q8N4T8 237 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 LRCH3Q96II8 777 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 KCNA7Q96RP8 456 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 IL1RL2Q9HB29 575 aa24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 DNMT3BQ9UBC3 853 aaKnown RBP24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 TNPO3Q9Y5L0 923 aaKnown RBP24.58■■□□□ 1.53
RUNDC3A-201ENST00000225441 RANBP2P49792 3224 aaKnown RBP24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 NRG2O14511 850 aaPredicted RBP24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 SNAP91O60641 907 aa24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 GJB3O75712 270 aa24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 ESR1P03372 595 aa24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 POU2F2P09086 479 aa24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 ENO2P09104 434 aaPredicted RBP24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 PTGER3P43115 390 aa24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 POLR2JP52435 117 aaKnown RBP24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 SMAD3P84022 425 aaKnown RBP24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 SLC36A3Q495N2 470 aa24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 SPNS2Q8IVW8 549 aa24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 OSCP1Q8WVF1 389 aa24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 KCTD14Q9BQ13 255 aaPredicted RBP24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 C19orf43Q9BQ61 176 aa24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 ADI1Q9BV57 179 aa24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 FAM50BQ9Y247 325 aa24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 BTRCQ9Y297 605 aa24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 PTGDR2Q9Y5Y4 395 aa24.57■■□□□ 1.52
RUNDC3A-201ENST00000225441 TCRBV5S2A0A599 114 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 RFXAPO00287 272 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 CDC7O00311 574 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 BTN3A1O00481 513 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 TSPAN12O95859 305 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 PRLP01236 227 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 GJA1P17302 382 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 CCR2P41597 374 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 EMX2Q04743 252 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 ZNF783Q6ZMS7 281 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 AADATQ8N5Z0 425 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 MDGA1Q8NFP4 955 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 LZICQ8WZA0 190 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 MYEOVQ96EZ4 313 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 HEBP1Q9NRV9 189 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 SMPD4Q9NXE4 827 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 CIDEBQ9UHD4 219 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 ANAPC2Q9UJX6 822 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 AGO1Q9UL18 857 aaKnown RBP24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 MYO7AQ13402 2215 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 A0A0D9SEW6 157 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 H3BSA7 217 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 ARNTLO00327 626 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 RHOP08100 348 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 PIRTP0C851 137 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 IRF1P10914 325 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 CORO1AP31146 461 aaKnown RBP24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 SLC5A2P31639 672 aa24.56■■□□□ 1.52
RUNDC3A-201ENST00000225441 ZFP36L2P47974 494 aaKnown RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms