RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ZNF490Q9ULM2 529 aaPredicted RBP13.58□□□□□ -0.24
SIX4-201ENST00000216513 SETD1AO15047 1707 aaKnown RBP13.58□□□□□ -0.24
SIX4-201ENST00000216513 KMOO15229 486 aa13.58□□□□□ -0.24
SIX4-201ENST00000216513 DUX1O43812 170 aa13.58□□□□□ -0.24
SIX4-201ENST00000216513 HEXBP07686 556 aa13.58□□□□□ -0.24
SIX4-201ENST00000216513 THEGLP0DJG4 465 aa13.58□□□□□ -0.24
SIX4-201ENST00000216513 ME2P23368 584 aa13.58□□□□□ -0.24
SIX4-201ENST00000216513 TNK2Q07912 1038 aa13.58□□□□□ -0.24
SIX4-201ENST00000216513 SNX20Q7Z614 316 aa13.58□□□□□ -0.24
SIX4-201ENST00000216513 HIC2Q96JB3 615 aa13.58□□□□□ -0.24
SIX4-201ENST00000216513 PRICKLE1Q96MT3 831 aaPredicted RBP13.58□□□□□ -0.24
SIX4-201ENST00000216513 KCNH1O95259 989 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 HNRNPKP61978 463 aaKnown RBP eCLIP13.57□□□□□ -0.24
SIX4-201ENST00000216513 MPP1Q00013 466 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 MSLNQ13421 630 aaPredicted RBP13.57□□□□□ -0.24
SIX4-201ENST00000216513 ZBTB49Q6ZSB9 765 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 TTC9BQ8N6N2 239 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 DCAF4L2Q8NA75 395 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 ZDHHC12Q96GR4 267 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 PCBD2Q9H0N5 130 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 BLOC1S6Q9UL45 172 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 GRID2O43424 1007 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 ATP5F1P24539 256 aaPredicted RBP13.57□□□□□ -0.24
SIX4-201ENST00000216513 CCNFP41002 786 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 MAPK12P53778 367 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 PRKAA2P54646 552 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 KCTD21Q4G0X4 260 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 TP53INP1Q96A56 240 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 AZIN2Q96A70 460 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 SLC17A6Q9P2U8 582 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 PGAP2Q9UHJ9 254 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 KDELR3O43731 214 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 CYP4B1P13584 511 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 LAPTM5Q13571 262 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 FASTKD3Q14CZ7 662 aaKnown RBP13.57□□□□□ -0.24
SIX4-201ENST00000216513 ZCWPW2Q504Y3 356 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 RNASEH2BQ5TBB1 312 aaKnown RBP13.57□□□□□ -0.24
SIX4-201ENST00000216513 CADM2Q8N3J6 435 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 OR13C4Q8NGS5 318 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 PPP3R2Q96LZ3 170 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 ALS2Q96Q42 1657 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 SAP18O00422 153 aaKnown RBP13.57□□□□□ -0.24
SIX4-201ENST00000216513 PREPP48147 710 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 C2orf80Q0P641 193 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 CEP78Q5JTW2 689 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 TMEM240Q5SV17 173 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 ABHD13Q7L211 337 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 GJD3Q8N144 294 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 TCEAL4Q96EI5 215 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 CCM2Q9BSQ5 444 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 CXorf56Q9H5V9 222 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 HRASLS2Q9NWW9 162 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 XPR1Q9UBH6 696 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 R3HDM2Q9Y2K5 976 aaKnown RBP13.57□□□□□ -0.24
SIX4-201ENST00000216513 TCAF1Q9Y4C2 921 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 PNMA8CA0A1B0GUJ8 204 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 FAM20BO75063 409 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 SIN3BO75182 1162 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 TULP3O75386 442 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 HLA-DQB2P05538 268 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 DCNP07585 359 aaKnown RBP13.57□□□□□ -0.24
SIX4-201ENST00000216513 GALK1P51570 392 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 ZNF805Q5CZA5 627 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 ANKRD54Q6NXT1 300 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 HSPA12BQ96MM6 686 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 S100A13Q99584 98 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 MRPL57Q9BQC6 102 aaKnown RBP13.57□□□□□ -0.24
SIX4-201ENST00000216513 PDE7BQ9NP56 450 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 SLC17A7Q9P2U7 560 aa13.57□□□□□ -0.24
SIX4-201ENST00000216513 TRIM43BA6NCK2 446 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 NRG3P56975 720 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 FAM171BQ6P995 826 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 TMEM130Q8N3G9 435 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 NELL1Q92832 810 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 VPS33AQ96AX1 596 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 APOLD1Q96LR9 279 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 SDCBP2Q9H190 292 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 EGFL7Q9UHF1 273 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 B4GALT2O60909 372 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 STK16O75716 305 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 KRT75O95678 551 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 ITGA2BP08514 1039 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 FAM163BP0C2L3 166 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 LBPP18428 481 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 PRKCHP24723 683 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 EPHA3P29320 983 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 IFNGR2P38484 337 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 GRIA4P48058 902 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 C9orf50Q5SZB4 431 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 WLSQ5T9L3 541 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 EMC10Q5UCC4 262 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 ZNF354BQ96LW1 612 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 ADGRG6Q86SQ4 1221 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 CPNE9Q8IYJ1 553 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 C6orf62Q9GZU0 229 aaPredicted RBP13.56□□□□□ -0.24
SIX4-201ENST00000216513 TBC1D17Q9HA65 648 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 ADAMTS5Q9UNA0 930 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 ITGA3P26006 1051 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 RYKP34925 604 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 MEA1Q16626 185 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms