RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 DLSTP36957 453 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 ATP5OP48047 213 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 VAV2P52735 878 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 DMPKQ09013 629 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 ITGA9Q13797 1035 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 NFE2L1Q14494 772 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 RPE65Q16518 533 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 GPRC6AQ5T6X5 926 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 DDHD1Q8NEL9 900 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 NAT14Q8WUY8 206 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 KLHL6Q8WZ60 621 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 ZDHHC12Q96GR4 267 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 RBM41Q96IZ5 413 aaKnown RBP14.69□□□□□ -0.06
UPK3A-201ENST00000216211 GORASP1Q9BQQ3 440 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 FICDQ9BVA6 458 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 FSD1LQ9BXM9 530 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 ZNF71Q9NQZ8 489 aaPredicted RBP14.69□□□□□ -0.06
UPK3A-201ENST00000216211 EPHA6Q9UF33 1036 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 CROTQ9UKG9 612 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 TRHDEQ9UKU6 1024 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 PCDHA13Q9Y5I0 950 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 ARL5AQ9Y689 179 aa14.69□□□□□ -0.06
UPK3A-201ENST00000216211 A0A0U1RQJ8 604 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 STX7O15400 261 aaKnown RBP14.68□□□□□ -0.06
UPK3A-201ENST00000216211 KIF5CO60282 957 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 SPAG6O75602 509 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 FGF5P12034 268 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 NELFEP18615 380 aaKnown RBP14.68□□□□□ -0.06
UPK3A-201ENST00000216211 GNG11P61952 73 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 MC1RQ01726 317 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 TLE1Q04724 770 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 IL11RAQ14626 422 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 SKIDA1Q1XH10 827 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 C11orf63Q6NUN7 778 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 BBS12Q6ZW61 710 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 DET1Q7L5Y6 550 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 DAAM2Q86T65 1068 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 KIAA1328Q86T90 577 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 TXLNBQ8N3L3 684 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 BEND7Q8N7W2 519 aaPredicted RBP14.68□□□□□ -0.06
UPK3A-201ENST00000216211 APOBEC4Q8WW27 367 aaKnown RBP14.68□□□□□ -0.06
UPK3A-201ENST00000216211 ZNF592Q92610 1267 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 STAMBPL1Q96FJ0 436 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 RAB33BQ9H082 229 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 LZTFL1Q9NQ48 299 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 LNPEPQ9UIQ6 1025 aa14.68□□□□□ -0.06
UPK3A-201ENST00000216211 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.68□□□□□ -0.06
UPK3A-201ENST00000216211 CFAP20Q9Y6A4 193 aaKnown RBP14.68□□□□□ -0.06
UPK3A-201ENST00000216211 DNMT3AQ9Y6K1 912 aaPredicted RBP14.68□□□□□ -0.06
UPK3A-201ENST00000216211 IGHV5-51A0A0C4DH38 117 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 APOC4-APOC2K7ER74 178 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 PJA2O43164 708 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 KATNA1O75449 491 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 TIAF1O95411 115 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 PRAMEF1O95521 474 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 APOC2P02655 101 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 MSH3P20585 1137 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 AKT1P31749 480 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 GEMP55040 296 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 XRCC4Q13426 336 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 OLIG2Q13516 323 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 KCNAB1Q14722 419 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 PLCL1Q15111 1095 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 CRTC2Q53ET0 693 aaPredicted RBP14.67□□□□□ -0.06
UPK3A-201ENST00000216211 FNBP1LQ5T0N5 605 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 CCDC181Q5TID7 509 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 DUS1LQ6P1R4 473 aaKnown RBP14.67□□□□□ -0.06
UPK3A-201ENST00000216211 PPP1R3BQ86XI6 285 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 SIDT2Q8NBJ9 832 aaKnown RBP14.67□□□□□ -0.06
UPK3A-201ENST00000216211 C9orf43Q8TAL5 461 aaPredicted RBP14.67□□□□□ -0.06
UPK3A-201ENST00000216211 ZNF398Q8TD17 642 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 ABHD17AQ96GS6 310 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 APOL2Q9BQE5 337 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 TSGA10Q9BZW7 698 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 WWP1Q9H0M0 922 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 GBA3Q9H227 469 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 IMP3Q9NV31 184 aaKnown RBP14.67□□□□□ -0.06
UPK3A-201ENST00000216211 SMOXQ9NWM0 555 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 FKBPLQ9UIM3 349 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 KCTD3Q9Y597 815 aa14.67□□□□□ -0.06
UPK3A-201ENST00000216211 PIKFYVEQ9Y2I7 2098 aa14.66□□□□□ -0.06
UPK3A-201ENST00000216211 MACROD2A1Z1Q3 448 aa14.66□□□□□ -0.06
UPK3A-201ENST00000216211 C2orf81A6NN90 581 aa14.66□□□□□ -0.06
UPK3A-201ENST00000216211 KRT86O43790 486 aa14.66□□□□□ -0.06
UPK3A-201ENST00000216211 ANXA9O76027 345 aa14.66□□□□□ -0.06
UPK3A-201ENST00000216211 FURINP09958 794 aa14.66□□□□□ -0.06
UPK3A-201ENST00000216211 MTHFD1P11586 935 aaKnown RBP14.66□□□□□ -0.06
UPK3A-201ENST00000216211 FOLR1P15328 257 aa14.66□□□□□ -0.06
UPK3A-201ENST00000216211 LPOP22079 712 aaPredicted RBP14.66□□□□□ -0.06
UPK3A-201ENST00000216211 CASQ1P31415 396 aa14.66□□□□□ -0.06
UPK3A-201ENST00000216211 OTUD4Q01804 1114 aaKnown RBP14.66□□□□□ -0.06
UPK3A-201ENST00000216211 ERV3-1Q14264 604 aa14.66□□□□□ -0.06
UPK3A-201ENST00000216211 TAF1AQ15573 450 aaPredicted RBP14.66□□□□□ -0.06
UPK3A-201ENST00000216211 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.66□□□□□ -0.06
UPK3A-201ENST00000216211 ITPRIPL1Q6GPH6 555 aa14.66□□□□□ -0.06
UPK3A-201ENST00000216211 CERS6Q6ZMG9 384 aa14.66□□□□□ -0.06
UPK3A-201ENST00000216211 MYRIPQ8NFW9 859 aa14.66□□□□□ -0.06
UPK3A-201ENST00000216211 OR4K2Q8NGD2 314 aa14.66□□□□□ -0.06
UPK3A-201ENST00000216211 ACTL9Q8TC94 416 aa14.66□□□□□ -0.06
UPK3A-201ENST00000216211 INSM2Q96T92 566 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms