RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Sall1Q9ER74 1322 aa6.97□□□□□ -1.29
Ccdc54-201ENSMUST00000062439 Trip11E9Q512 1976 aa6.97□□□□□ -1.29
Ccdc54-201ENSMUST00000062439 Atad5Q4QY64 1826 aa6.97□□□□□ -1.29
Ccdc54-201ENSMUST00000062439 Kif26aQ52KG5 1881 aa6.96□□□□□ -1.29
Ccdc54-201ENSMUST00000062439 Tmem156A0A1D5RLR8 321 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Cldn34b1B1AZQ8 209 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ppp1r36D3Z0R2 411 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Zfp839E9PUU5 921 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Tmem265E9Q8G3 109 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Zfp108E9Q8I5 642 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Raet1cO08604 253 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Mmp15O54732 657 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Pip5k1cO70161 661 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Lnx1O70263 728 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Psma3O70435 255 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Tnfrsf17O88472 185 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 RapsnP12672 412 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Mcpt2P15119 244 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Hsd3b1P24815 373 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Paxbp1P58501 919 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Nxpe2Q3U095 558 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Taar9Q5QD04 348 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 MycbpapQ5SUV2 932 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Etaa1Q5SVT3 877 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 PostnQ62009 838 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Irak1Q62406 710 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Atg16l2Q6KAU8 623 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Prmt6Q6NZB1 378 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 TxlnaQ6PAM1 554 aaKnown RBP6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Srsf1Q6PDM2 248 aaKnown RBP6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Casc1Q6TDU8 730 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Fsd1Q7TPM6 496 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Cldn34b3Q80ZS5 209 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Prr3Q811B5 190 aaKnown RBP6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ttc7aQ8BGB2 858 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ccdc40Q8BI79 1192 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Edem2Q8BJT9 577 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Tspan9Q8BJU2 239 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 CenpiQ8K1K4 746 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Cchcr1Q8K2I2 770 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Dcaf8Q8N7N5 591 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Olfr777Q8VFH3 311 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 UmodQ91X17 642 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Smc1aQ9CU62 1233 aaKnown RBP6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Agpat5Q9D1E8 365 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Adgrf4Q9D2L6 698 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Lrrc71Q9D3W5 558 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Dnajc4Q9D844 244 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Cnot8Q9D8X5 292 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Cldn34b2Q9D9N2 209 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Tmprss2Q9JIQ8 490 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 GraspQ9JJA9 392 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Adam28Q9JLN6 793 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Chrna6Q9R0W9 494 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Adgrf5G5E8Q8 1348 aa6.96□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Gm42715A0A087WP63 3095 aaKnown RBP6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ank3G5E8K5 1961 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Gm5737A0A140LI11 423 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Gm29133A0A1B0GT72 266 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Pfkfb3A7UAK5 555 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 SelenonD3Z2R5 557 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Zfand4D3Z3C6 739 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Foxn2E9Q7L6 429 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Cdk5r2O35926 369 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 CidebO70303 219 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 ItgalP24063 1163 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Cd81P35762 236 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Fgf8P37237 268 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Pik3caP42337 1068 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Foxp1P58462 705 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Klhl8P59280 629 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Arhgap39P59281 1107 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Adcy5P84309 1262 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Meis2P97367 477 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 CenptQ3TJM4 515 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Esyt3Q5DTI8 891 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Nlrc3Q5DU56 1064 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Samhd1Q60710 627 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 S100a15aQ6S5I3 108 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Olfr298Q7TS06 332 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Mcph1Q7TT79 822 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Kctd3Q8BFX3 815 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 AopepQ8BXQ6 817 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 RadxQ8C779 850 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Galnt13Q8CF93 556 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Acvr1cQ8K348 493 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Appl2Q8K3G9 662 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Tesk2Q8VCT9 570 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Olfr820Q8VFU5 312 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Pomgnt1Q91X88 660 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Lnx2Q91XL2 687 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Tubb6Q922F4 447 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Vwa5aQ99KC8 793 aaKnown RBP6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Chordc1Q9D1P4 331 aaKnown RBP6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ccdc91Q9D8L5 442 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 LlphQ9D945 130 aaKnown RBP6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ftsj3Q9DBE9 838 aaKnown RBP6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ipo7Q9EPL8 1038 aaKnown RBP6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Rilpl1Q9JJC6 406 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Msgn1Q9JK54 188 aa6.95□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms