RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 TrmuQ9DAT5 417 aa16.67■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Ppp1r2Q9DCL8 206 aa16.67■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Timp4Q9JHB3 224 aa16.67■□□□□ 0.26
Ctcf-201ENSMUST00000005841 DguokQ9QX60 277 aa16.67■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Itga8A2ARA8 1062 aa16.67■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Catsperg2C6KI89 1145 aa16.67■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Clk3O35492 638 aa16.67■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Ctnnd2O35927 1247 aa16.67■□□□□ 0.26
Ctcf-201ENSMUST00000005841 ItgamP05555 1153 aa16.67■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Hoxb13P70321 286 aa16.67■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Aqp1Q02013 269 aa16.67■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Tead4Q62296 427 aa16.67■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Zdhhc19Q810M5 347 aa16.67■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Ncs1Q8BNY6 190 aa16.67■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Abhd4Q8VD66 342 aa16.67■□□□□ 0.26
Ctcf-201ENSMUST00000005841 2010109A12RikQ9D875 119 aa16.67■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Pcsk2P21661 637 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 SgcdP82347 289 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 CdonQ32MD9 1250 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Traf3ip2Q8N7N6 555 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Prmt7Q922X9 692 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Nlrc5C3VPR6 1915 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Smim10l2aA0A0B4J1F8 78 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Ccnb1ip1D3Z3K2 276 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Kcnj1O88335 372 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Fcgr2P08101 330 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Slc16a10Q3U9N9 512 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 BtrcQ3ULA2 605 aaKnown RBP16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Cnih3Q6ZWS4 160 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Olfr389Q7TRX7 312 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Igsf5Q7TSN7 370 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Zbtb6Q8K088 423 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Zfp940Q8R2Q3 566 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Ntmt1Q8R2U4 223 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Psip1Q99JF8 528 aaKnown RBP16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Lama3Q61789 3330 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Pcm1Q9R0L6 2025 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Iqca1lA6H690 825 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Pros1Q08761 675 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Fam171bQ14CH0 825 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Tmem173Q3TBT3 378 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 FicdQ8BIX9 458 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Nrip1Q8CBD1 1161 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 FggQ8VCM7 436 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Socs7Q8VHQ2 579 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Oas1hQ8VI97 369 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Riok2Q9CQS5 547 aa16.66■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Gm10639E9Q6L7 222 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 GfapP03995 430 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Gsta2P10648 222 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Aarsd1Q3THG9 412 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 TiprlQ8BH58 271 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Hs3st5Q8BSL4 346 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 DrgxQ8BYH0 263 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Rbm4Q8C7Q4 361 aaKnown RBP16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Rbm4bQ8VE92 357 aaKnown RBP16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Olfr1153A2AVC0 318 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Ssxb6A2BI74 170 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 4930595M18RikA2RRY9 829 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Gm8113E0CXS8 587 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Rpl3lE9PWZ3 407 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 P01652 108 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Hmgb2P30681 210 aaKnown RBP16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Agtr2P35374 363 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Rab8aP55258 207 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Otud5Q3U2S4 566 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Spdye4bQ8CDE8 236 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Tmem259Q8CIV2 574 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Slc38a4Q8R1S9 547 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Tmco4Q91WU4 631 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Alg13Q9D8C3 1166 aaKnown RBP16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Dnajb7Q9QYI8 312 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Olfr67F8VPJ8 320 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 GemP55041 295 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Ldb1P70662 411 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 SbplQ3TUY3 232 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Psmd11Q8BG32 422 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Ndrg4Q8BTG7 352 aaKnown RBP16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Ccdc142Q8CAI1 738 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Ifi205aQ8CGE8 404 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Vps39Q8R5L3 886 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 CenpvQ9CXS4 252 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Cdkn2aipnlQ9D211 116 aaKnown RBP16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Mettl15Q9DCL4 406 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Tpk1Q9R0M5 243 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Wdr81Q5ND34 1934 aa16.65■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Cldn5O54942 218 aa16.64■□□□□ 0.26
Ctcf-201ENSMUST00000005841 FlgP11088 336 aa16.64■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Pim3P58750 326 aa16.64■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Hoxd1Q01822 328 aa16.64■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Wipi2Q80W47 445 aa16.64■□□□□ 0.26
Ctcf-201ENSMUST00000005841 D3Ertd751eQ8BGN2 192 aa16.64■□□□□ 0.26
Ctcf-201ENSMUST00000005841 B3gnt5Q8BGY6 376 aa16.64■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Brd8Q8R3B7 951 aa16.64■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Rnf8Q8VC56 488 aa16.64■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Nudt14Q9D142 222 aa16.64■□□□□ 0.26
Ctcf-201ENSMUST00000005841 D10Jhu81eQ9D172 266 aa16.64■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Haus5Q9D786 619 aa16.64■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Vps35Q9EQH3 796 aaKnown RBP16.64■□□□□ 0.26
Ctcf-201ENSMUST00000005841 Gbp11A9YVJ5 442 aa16.64■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms