RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 M1apQ9Z0E1 529 aa16.03■□□□□ 0.16
Trim28-201ENSMUST00000005705 Vmn2r2L7N2E9 908 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 P01670 111 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 P01671 111 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 P01672 111 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Ankrd27Q3UMR0 1048 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Q5EBG8 199 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Khdrbs1Q60749 443 aaKnown RBP16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 BegainQ68EF6 600 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 ChpfQ6IQX7 774 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Rundc3bQ6PDC0 408 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Olfr1252Q7TQZ2 314 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Fndc11Q80WB0 326 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Rbm11Q80YT9 238 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Phf11aQ8BVM9 293 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Slc49a3Q8CE47 516 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Slc29a4Q8R139 528 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Mcoln3Q8R4F0 553 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Nle1Q8VEJ4 485 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Acer3Q9D099 267 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Q9D5Y0 588 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Slc6a14Q9JMA9 638 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Rad18Q9QXK2 509 aaKnown RBP16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Nrg4Q9WTX4 115 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Tmem45a2B7ZWJ5 289 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Vmn2r21K7N6Y7 853 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Vmn2r20L7N2B1 853 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 GaaP70699 953 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 CrxosQ3UL53 246 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Kmt5cQ6Q783 468 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Rdh12Q8BYK4 316 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Psapl1Q8C1C1 522 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Nrn1lQ8C4W3 162 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Lsm14aQ8K2F8 462 aaKnown RBP16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 ClmpQ8R373 373 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Serpinb11Q9CQV3 388 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Ccdc77Q9CZH8 489 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Epb41l1Q9Z2H5 879 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Osbpl10S4R1M9 766 aa16.02■□□□□ 0.16
Trim28-201ENSMUST00000005705 Fam151bD3YUE4 279 aa16.02■□□□□ 0.15
Trim28-201ENSMUST00000005705 Rab8aP55258 207 aa16.02■□□□□ 0.15
Trim28-201ENSMUST00000005705 SvoplQ6PDF3 494 aa16.02■□□□□ 0.15
Trim28-201ENSMUST00000005705 Q8CDN1 933 aa16.02■□□□□ 0.15
Trim28-201ENSMUST00000005705 Rab15Q8K386 212 aa16.02■□□□□ 0.15
Trim28-201ENSMUST00000005705 Dppa5aQ9CQS7 118 aa16.02■□□□□ 0.15
Trim28-201ENSMUST00000005705 Raver1Q9CW46 748 aaKnown RBP16.02■□□□□ 0.15
Trim28-201ENSMUST00000005705 4930524N10RikQ9D519 233 aa16.02■□□□□ 0.15
Trim28-201ENSMUST00000005705 PgcQ9D7R7 392 aa16.02■□□□□ 0.15
Trim28-201ENSMUST00000005705 AcadsbQ9DBL1 432 aa16.02■□□□□ 0.15
Trim28-201ENSMUST00000005705 Myo16Q5DU14 1919 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 9330159F19RikD3Z623 648 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Sdc4O35988 198 aaKnown RBP16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Apoa4P06728 395 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Btg3P50615 252 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Cyp2c38P56655 490 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Echdc2Q3TLP5 296 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Zyg11bQ3UFS0 744 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Hdgfl2Q3UMU9 669 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Actr3bQ641P0 418 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Nr6a1Q64249 495 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Plekha6Q7TQG1 1173 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Tyw1Q8BJM7 721 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 GmppbQ8BTZ7 360 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Lrch3Q8BVU0 778 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Mab21L3Q8CI17 429 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Ankra2Q99PE2 312 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Il22Q9JJY9 179 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Rfc2Q9WUK4 349 aaKnown RBP16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 PrebQ9WUQ2 417 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Jbts17Q8CE72 3214 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Akap17bA2A3V1 959 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Cped1B2RX70 1026 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Gm8237E9Q257 205 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Gm6811E9Q3Y8 510 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Rnf169E9Q7F2 694 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Trim15G3UY57 292 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Vmn2r38G3UYA8 861 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Vmn2r33K7N705 861 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Enpp1P06802 906 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Ncam1P13595 1115 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 BgnP28653 369 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 MitfQ08874 526 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Zfp280bQ505F4 534 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Ckmt2Q6P8J7 419 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Rxfp4Q7TQP4 414 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Hamp2Q80T19 83 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 AftphQ80WT5 931 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Taf12Q8VE65 161 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 AdprmQ99KS6 340 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Efcab9Q9DAM2 216 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Epb41l4bQ9JMC8 527 aa16.01■□□□□ 0.15
Trim28-201ENSMUST00000005705 Maml2F6U238 1170 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Grk4O70291 574 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Hcrtr1P58307 416 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Pex11gQ6P6M5 241 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Olfr1046Q7TR79 316 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Olfr814Q7TRH4 310 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Fam221bQ8C627 487 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 GaleQ8R059 347 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Vmn1r22Q8R2D1 302 aa16■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms