RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 SF3A3Q12874 501 aaKnown RBP eCLIP12.94□□□□□ -0.341e-9■■■■□ 22.2
PHGDH-221ENST00000641573 GKAP1Q5VSY0 366 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-221ENST00000641573 AGBL4Q5VU57 503 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 CES4AQ5XG92 561 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 CGB2Q6NT52 195 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 ZCCHC23Q6ZST2 131 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 ZNF765Q7L2R6 523 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 OTOAQ7RTW8 1153 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 ZNF687Q8N1G0 1237 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 NKAPQ8N5F7 415 aaKnown RBP12.94□□□□□ -0.34
PHGDH-221ENST00000641573 CLDN19Q8N6F1 224 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 GIMAP7Q8NHV1 300 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 LKAAEAR1Q8TD35 194 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 CD200R1Q8TD46 325 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 NAT14Q8WUY8 206 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 SREK1Q8WXA9 508 aaKnown RBP12.94□□□□□ -0.34
PHGDH-221ENST00000641573 FAM3CQ92520 227 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 INPP5DQ92835 1189 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 GRAMD1AQ96CP6 724 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 NUS1Q96E22 293 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 SGF29Q96ES7 293 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 SEC16BQ96JE7 1060 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 DHRS7Q9Y394 339 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 FASNP49327 2511 aaKnown RBP12.94□□□□□ -0.34
PHGDH-221ENST00000641573 ZFYVE26Q68DK2 2539 aa12.94□□□□□ -0.34
PHGDH-221ENST00000641573 A0A1W2PP55 124 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 A0A1W2PQF6 199 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 TSPAN6O43657 245 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 AP1G1O43747 822 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 ZBTB14O43829 449 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 DLX3O60479 287 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 SNX3O60493 162 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 TRIM13O60858 407 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 RNASEH2AO75792 299 aaKnown RBP12.93□□□□□ -0.34
PHGDH-221ENST00000641573 SLC25A14O95258 325 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-221ENST00000641573 TRIM16O95361 564 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 TDGF1P13385 188 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 ITGB6P18564 788 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 GRK2P25098 689 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 AKT1P31749 480 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 CNR2P34972 360 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 CXCL12P48061 93 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 PRKAA2P54646 552 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 ATP6V0D1P61421 351 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 B4GALNT1Q00973 533 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 CREB5Q02930 508 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 CCDC15Q0P6D6 951 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 FBXO43Q4G163 708 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 MAMSTRQ6ZN01 415 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 SPATA21Q7Z572 469 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 ISCA2Q86U28 154 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 CPNE9Q8IYJ1 553 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 GANCQ8TET4 914 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 BTN2A2Q8WVV5 523 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 PTERQ96BW5 349 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 DCUN1D1Q96GG9 259 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 VPS35Q96QK1 796 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 DERL2Q9GZP9 239 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 TFB2MQ9H5Q4 396 aaKnown RBP12.93□□□□□ -0.34
PHGDH-221ENST00000641573 ALG9Q9H6U8 611 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 OXSMQ9NWU1 459 aa12.93□□□□□ -0.34
PHGDH-221ENST00000641573 ERICH4A6NGS2 130 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 CFAP99D6REC4 459 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 F8W8V4 182 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 SNNO75324 88 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-221ENST00000641573 H2AFYO75367 372 aaKnown RBP12.92□□□□□ -0.34
PHGDH-221ENST00000641573 DNTTP04053 509 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 OR56A5P0C7T3 313 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 HOXB3P14651 431 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-221ENST00000641573 MSH3P20585 1137 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 ATP5F1P24539 256 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-221ENST00000641573 SLC1A6P48664 564 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 LIMK1P53667 647 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 TAS2R38P59533 333 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 IL2P60568 153 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 OCRLQ01968 901 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 FZD5Q13467 585 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 EOGTQ5NDL2 527 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 LDLRAP1Q5SW96 308 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 LIPMQ5VYY2 423 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 FOXR1Q6PIV2 292 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 UNQ6494/PRO21346Q6UXR6 183 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 CEP68Q76N32 757 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 TMPRSS6Q8IU80 811 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 CACNA2D3Q8IZS8 1091 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 CCDC197Q8NCU1 140 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 DDHD1Q8NEL9 900 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 OR6Y1Q8NGX8 325 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 RPLP0P6Q8NHW5 317 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 EEF1AKMT1Q8WVE0 214 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 GLYATL1Q969I3 302 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 LINGO1Q96FE5 620 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 C7orf26Q96N11 449 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 GATA5Q9BWX5 397 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-221ENST00000641573 MKRN2Q9H000 416 aaKnown RBP12.92□□□□□ -0.34
PHGDH-221ENST00000641573 SLC6A17Q9H1V8 727 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 ZNF395Q9H8N7 513 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-221ENST00000641573 CD248Q9HCU0 757 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 THAP1Q9NVV9 213 aa12.92□□□□□ -0.34
PHGDH-221ENST00000641573 SERGEFQ9UGK8 458 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms