RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 DCKP27707 260 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 MTHFRP42898 656 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 C21orf59P57076 290 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 PTGR1Q14914 329 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 RFTN2Q52LD8 501 aaPredicted RBP16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 CCNYL2Q5T2Q4 361 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 LINGO4Q6UY18 593 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 TRIM74Q86UV6 250 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 TRIM73Q86UV7 250 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 GFM2Q969S9 779 aaKnown RBP16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 CINPQ9BW66 212 aaPredicted RBP16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 ARMC7Q9H6L4 198 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 TRMT13Q9NUP7 481 aaKnown RBP16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 TBC1D23Q9NUY8 699 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 NLE1Q9NVX2 485 aaPredicted RBP16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 WARS2Q9UGM6 360 aaKnown RBP16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 DGKBQ9Y6T7 804 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 TDRD15B5MCY1 1934 aaKnown RBP16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 CBX4O00257 560 aa16.33■□□□□ 0.21
HNRNPU-228ENST00000640306 VPS26AO75436 327 aa16.33■□□□□ 0.21
HNRNPU-228ENST00000640306 BMP1P13497 986 aa16.33■□□□□ 0.21
HNRNPU-228ENST00000640306 TACR2P21452 398 aa16.33■□□□□ 0.21
HNRNPU-228ENST00000640306 PRKACGP22612 351 aa16.33■□□□□ 0.21
HNRNPU-228ENST00000640306 EEFSECP57772 596 aaKnown RBP16.33■□□□□ 0.21
HNRNPU-228ENST00000640306 EMX2Q04743 252 aa16.33■□□□□ 0.21
HNRNPU-228ENST00000640306 TRIP4Q15650 581 aaPredicted RBP16.33■□□□□ 0.21
HNRNPU-228ENST00000640306 CTSL3PQ5NE16 218 aa16.33■□□□□ 0.21
HNRNPU-228ENST00000640306 HID1Q8IV36 788 aa16.33■□□□□ 0.21
HNRNPU-228ENST00000640306 THUMPD3Q9BV44 507 aaKnown RBP16.33■□□□□ 0.21
HNRNPU-228ENST00000640306 PCDHB8Q9UN66 801 aa16.33■□□□□ 0.21
HNRNPU-228ENST00000640306 CORINQ9Y5Q5 1042 aa16.33■□□□□ 0.21
HNRNPU-228ENST00000640306 U3KQV3 271 aa16.33■□□□□ 0.21
HNRNPU-228ENST00000640306 TRPM7Q96QT4 1865 aa16.33■□□□□ 0.21
HNRNPU-228ENST00000640306 C1orf232A0A0U1RR37 186 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 FAM234BA2RU67 622 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 PKMP14618 531 aaKnown RBP16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 SLC6A4P31645 630 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 IL2P60568 153 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 TGFBIQ15582 683 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 CTXN3Q4LDR2 81 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 VARS2Q5ST30 1063 aaKnown RBP16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 ANKRD26P1Q6NSI1 321 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 AFTPHQ6ULP2 937 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 DLEU7Q6UYE1 221 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 Q6ZNX1 250 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 CROCCP3Q8IVE0 287 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 ABI1Q8IZP0 508 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 CLHC1Q8NHS4 586 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 TRIB3Q96RU7 358 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 BRINP2Q9C0B6 783 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 TOR3AQ9H497 397 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 ACTL8Q9H568 366 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 POPDC3Q9HBV1 291 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 ZFP14Q9HCL3 533 aa16.33■□□□□ 0.2
HNRNPU-228ENST00000640306 UPK1AO00322 258 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 AOC2O75106 756 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 MLYCDO95822 493 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 ENO2P09104 434 aaPredicted RBP16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 TYMPP19971 482 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 HOXD9P28356 352 aaPredicted RBP16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 GDF5P43026 501 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 HLCSP50747 726 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 BMXP51813 675 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 CAP1Q01518 475 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 NFATC3Q12968 1075 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 MEP1AQ16819 746 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 COQ5Q5HYK3 327 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 CYP20A1Q6UW02 462 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 R3HCC1LQ7Z5L2 792 aaKnown RBP16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 ZFAND4Q86XD8 727 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 PARP8Q8N3A8 854 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 OR10A6Q8NH74 314 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 CD200R1Q8TD46 325 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 LZICQ8WZA0 190 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 SNX19Q92543 992 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 ACDQ96AP0 544 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 PLEKHA8Q96JA3 519 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 LHPPQ9H008 270 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 RIC8BQ9NVN3 520 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 FAIMQ9NVQ4 179 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 VAPAQ9P0L0 249 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 FNIP2Q9P278 1114 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 LIMD1Q9UGP4 676 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 PCDHB5Q9Y5E4 795 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 ZFP37Q9Y6Q3 630 aaPredicted RBP16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 TRIM64A6NGJ6 449 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 TLR5O60602 858 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 HTR1EP28566 365 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 ABRAXAS2Q15018 415 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 NKG7Q16617 165 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 AP5B1Q2VPB7 878 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 GALNT18Q6P9A2 607 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 USP51Q70EK9 711 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 FRA10AC1Q70Z53 315 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 C16orf59Q7L2K0 433 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 ITCHQ96J02 903 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 GLT1D1Q96MS3 346 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 CGREF1Q99674 301 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 HCSTQ9UBK5 93 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 ZNF510Q9Y2H8 683 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms