RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 PBLDP30039 288 aaPredicted RBP18.61■□□□□ 0.57
CLN6-221ENST00000637494 ADRA1AP35348 466 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 DMPKQ09013 629 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 PARP6Q2NL67 630 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 FNBP1LQ5T0N5 605 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 CYB5D1Q6P9G0 228 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 KLHL35Q6PF15 583 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 XKR5Q6UX68 686 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 CACNA2D3Q8IZS8 1091 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 BEND7Q8N7W2 519 aaPredicted RBP18.61■□□□□ 0.57
CLN6-221ENST00000637494 HEXDCQ8WVB3 486 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 ZDHHC12Q96GR4 267 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 C9orf72Q96LT7 481 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 TGM7Q96PF1 710 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 GORASP1Q9BQQ3 440 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 DESI2Q9BSY9 194 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 TSGA10Q9BZW7 698 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 SLC40A1Q9NP59 571 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 PACSIN2Q9UNF0 486 aaPredicted RBP18.61■□□□□ 0.57
CLN6-221ENST00000637494 PRR19A6NJB7 356 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 CFAP99D6REC4 459 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 PSMD3O43242 534 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 C9P02748 559 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 ITGB2P05107 769 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 BRAFP15056 766 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 ITGALP20701 1170 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 GPR18Q14330 331 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 PTPRCAPQ14761 206 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 P3H1Q32P28 736 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 PCSK4Q6UW60 755 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 TMEM139Q8IV31 216 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 RNF10Q8N5U6 811 aaKnown RBP18.6■□□□□ 0.57
CLN6-221ENST00000637494 BMPERQ8N8U9 685 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 UBE2Q2Q8WVN8 375 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 NKD1Q969G9 470 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 KIAA1143Q96AT1 154 aaPredicted RBP18.6■□□□□ 0.57
CLN6-221ENST00000637494 ALS2CR12Q96Q35 445 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 CTRCQ99895 268 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 C19orf43Q9BQ61 176 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 TRIT1Q9H3H1 467 aaKnown RBP18.6■□□□□ 0.57
CLN6-221ENST00000637494 LRRC40Q9H9A6 602 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 FKBPLQ9UIM3 349 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 PCDHGA4Q9Y5G9 962 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 SLC30A1Q9Y6M5 507 aa18.6■□□□□ 0.57
CLN6-221ENST00000637494 GAPDHSO14556 408 aaPredicted RBP18.59■□□□□ 0.57
CLN6-221ENST00000637494 CAPN5O15484 640 aaPredicted RBP18.59■□□□□ 0.57
CLN6-221ENST00000637494 GPR39O43194 453 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 RAD1O60671 282 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 MAP4P27816 1152 aaKnown RBP18.59■□□□□ 0.57
CLN6-221ENST00000637494 CAPZBP47756 277 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 CTSCP53634 463 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 GFERP55789 205 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 FOXM1Q08050 763 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 SRSF6Q13247 344 aaKnown RBP18.59■□□□□ 0.57
CLN6-221ENST00000637494 LY6DQ14210 128 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 CLCA4Q14CN2 919 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 PLCL1Q15111 1095 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 SEL1L2Q5TEA6 688 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 IRGCQ6NXR0 463 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 DET1Q7L5Y6 550 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 ZNF605Q86T29 641 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 NLGN4XQ8N0W4 816 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 ZNF843Q8N446 348 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 FAM71DQ8N9W8 422 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 NLGN4YQ8NFZ3 816 aaPredicted RBP18.59■□□□□ 0.57
CLN6-221ENST00000637494 PMEPA1Q969W9 287 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 RTP4Q96DX8 246 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 MED8Q96G25 268 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 EFHD1Q9BUP0 239 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 ARNT2Q9HBZ2 717 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 ACSL5Q9ULC5 683 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 PSMD13Q9UNM6 376 aa18.59■□□□□ 0.57
CLN6-221ENST00000637494 MGAT4DA6NG13 374 aa18.58■□□□□ 0.56
CLN6-221ENST00000637494 DDX3YO15523 660 aaKnown RBP18.58■□□□□ 0.56
CLN6-221ENST00000637494 KRT86O43790 486 aa18.58■□□□□ 0.56
CLN6-221ENST00000637494 C1QL1O75973 258 aa18.58■□□□□ 0.56
CLN6-221ENST00000637494 GSDMDP57764 484 aa18.58■□□□□ 0.56
CLN6-221ENST00000637494 TMPRSS15P98073 1019 aa18.58■□□□□ 0.56
CLN6-221ENST00000637494 OLIG2Q13516 323 aa18.58■□□□□ 0.56
CLN6-221ENST00000637494 NFE2L1Q14494 772 aa18.58■□□□□ 0.56
CLN6-221ENST00000637494 SPARCL1Q14515 664 aa18.58■□□□□ 0.56
CLN6-221ENST00000637494 CACHD1Q5VU97 1274 aa18.58■□□□□ 0.56
CLN6-221ENST00000637494 OR13C4Q8NGS5 318 aa18.58■□□□□ 0.56
CLN6-221ENST00000637494 HES6Q96HZ4 224 aa18.58■□□□□ 0.56
CLN6-221ENST00000637494 ZNF768Q9H5H4 540 aaKnown RBP18.58■□□□□ 0.56
CLN6-221ENST00000637494 IMP3Q9NV31 184 aaKnown RBP18.58■□□□□ 0.56
CLN6-221ENST00000637494 OGFRQ9NZT2 677 aa18.58■□□□□ 0.56
CLN6-221ENST00000637494 WDR37Q9Y2I8 494 aa18.58■□□□□ 0.56
CLN6-221ENST00000637494 KCTD3Q9Y597 815 aa18.58■□□□□ 0.56
CLN6-221ENST00000637494 LOC400499M0QZD8 3231 aa18.58■□□□□ 0.56
CLN6-221ENST00000637494 GAS8O95995 478 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 SLC35G4P0C7Q5 338 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 SFTPCP11686 197 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 SEPHS1P49903 392 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 ARSDP51689 593 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 KRT33BQ14525 404 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 GSE1Q14687 1217 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 RPE65Q16518 533 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 GPR33Q49SQ1 333 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 BCL7AQ4VC05 210 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms