RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 DMPKQ09013 629 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 RPA4Q13156 261 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 SMAD1Q15797 465 aaKnown RBP8.08□□□□□ -1.12
PNKP-226ENST00000636840 DBN1Q16643 649 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 CLPPQ16740 277 aaPredicted RBP8.08□□□□□ -1.12
PNKP-226ENST00000636840 LONRF1Q17RB8 773 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 BBS9Q3SYG4 887 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 ANKRD20A4Q4UJ75 823 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 KHDC1Q4VXA5 237 aaKnown RBP8.08□□□□□ -1.12
PNKP-226ENST00000636840 RNF187Q5TA31 235 aaPredicted RBP8.08□□□□□ -1.12
PNKP-226ENST00000636840 AGAP9Q5VTM2 703 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 METRNLQ641Q3 311 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 PTRHD1Q6GMV3 140 aaKnown RBP8.08□□□□□ -1.12
PNKP-226ENST00000636840 KIAA0930Q6ICG6 404 aaPredicted RBP8.08□□□□□ -1.12
PNKP-226ENST00000636840 NEPROQ6NW34 567 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 CTAGE6Q86UF2 777 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 PIM3Q86V86 326 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 C17orf82Q86X59 251 aaPredicted RBP8.08□□□□□ -1.12
PNKP-226ENST00000636840 CTAGE4Q8IX94 777 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 NAGSQ8N159 534 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 SFRP1Q8N474 314 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 CEP112Q8N8E3 955 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 Q8N9G6 341 aaPredicted RBP8.08□□□□□ -1.12
PNKP-226ENST00000636840 KYQ8NBH2 561 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 OR10G6Q8NH81 332 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 HM13Q8TCT9 377 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 ZFPM2Q8WW38 1151 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 CCDC74AQ96AQ1 378 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 MFSD3Q96ES6 412 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 STAMBPL1Q96FJ0 436 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 SIGLEC10Q96LC7 697 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 ZNF778Q96MU6 729 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 PANX3Q96QZ0 392 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 STRADBQ9C0K7 418 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 ZMYND15Q9H091 742 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 CCDC68Q9H2F9 335 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 LRRN3Q9H3W5 708 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 EPB41L1Q9H4G0 881 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 CAAP1Q9H8G2 361 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 EPB41L5Q9HCM4 733 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 SARS2Q9NP81 518 aaKnown RBP8.08□□□□□ -1.12
PNKP-226ENST00000636840 PRDM8Q9NQV8 689 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 TREX1Q9NSU2 369 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 TOR4AQ9NXH8 423 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 KCNK4Q9NYG8 393 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 AKAP7Q9P0M2 348 aaPredicted RBP8.08□□□□□ -1.12
PNKP-226ENST00000636840 CPNE7Q9UBL6 633 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 TBC1D29Q9UFV1 150 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 SLC23A2Q9UGH3 650 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 SNX24Q9Y343 169 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 MSRB2Q9Y3D2 182 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 HEBP2Q9Y5Z4 205 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 RNF215Q9Y6U7 377 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 COLEC10Q9Y6Z7 277 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 UNC13CQ8NB66 2214 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 ASXL3Q9C0F0 2248 aa8.08□□□□□ -1.12
PNKP-226ENST00000636840 LY6G6EA0A0G2JKS1 128 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 UBA6A0AVT1 1052 aaPredicted RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 MED19A0JLT2 244 aaPredicted RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 FAM221BA6H8Z2 402 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 OR51F1A6NGY5 319 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 PRMT5O14744 637 aaPredicted RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 LIN7AO14910 233 aaPredicted RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 KDM1AO60341 852 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 TMEM63AO94886 807 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 SEC31AO94979 1220 aaKnown RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 RPLP0P05388 317 aaKnown RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 SLC35G4P0C7Q5 338 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 PGAM1P18669 254 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 IVDP26440 423 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 RPL10P27635 214 aaKnown RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 FASLGP48023 281 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 PRLHRP49683 370 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 CDKN1CP49918 316 aaPredicted RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 CTSCP53634 463 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 DRG2P55039 364 aaKnown RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 MAZP56270 477 aaKnown RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 CCL7P80098 99 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 GPLD1P80108 840 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 INSM1Q01101 510 aaPredicted RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 C2orf54Q08AI8 447 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 HIF1AQ16665 826 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 SYTL3Q4VX76 610 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 GLE1Q53GS7 698 aaKnown RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 PERM1Q5SV97 790 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 HES3Q5TGS1 186 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 HIBCHQ6NVY1 386 aaPredicted RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 C8orf74Q6P047 294 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 TTC23LQ6PF05 361 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 KLHL35Q6PF15 583 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 CES3Q6UWW8 571 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 PACS1Q6VY07 963 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 RBM44Q6ZP01 1051 aaKnown RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 CEP128Q6ZU80 1094 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 ZNF534Q76KX8 674 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 ZNF572Q7Z3I7 529 aaPredicted RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 C11orf96Q7Z7L8 435 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 TMEM135Q86UB9 458 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 ZNF547Q8IVP9 402 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 PIANPQ8IYJ0 282 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms