RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 DTLQ9NZJ0 730 aa17.73■□□□□ 0.43
CLN6-212ENST00000636020 A0A1W2PQJ5 194 aa17.72■□□□□ 0.43
CLN6-212ENST00000636020 PRICKLE3O43900 615 aaPredicted RBP17.72■□□□□ 0.43
CLN6-212ENST00000636020 ZBTB11O95625 1053 aaPredicted RBP17.72■□□□□ 0.43
CLN6-212ENST00000636020 PRLP01236 227 aa17.72■□□□□ 0.43
CLN6-212ENST00000636020 TSFMP43897 325 aaKnown RBP17.72■□□□□ 0.43
CLN6-212ENST00000636020 HCAR3P49019 387 aa17.72■□□□□ 0.43
CLN6-212ENST00000636020 DRG2P55039 364 aaKnown RBP17.72■□□□□ 0.43
CLN6-212ENST00000636020 KRTAP10-9P60411 292 aa17.72■□□□□ 0.43
CLN6-212ENST00000636020 ABRQ12979 859 aa17.72■□□□□ 0.43
CLN6-212ENST00000636020 CLEC16AQ2KHT3 1053 aa17.72■□□□□ 0.43
CLN6-212ENST00000636020 PPP6R3Q5H9R7 873 aaPredicted RBP17.72■□□□□ 0.43
CLN6-212ENST00000636020 MARC1Q5VT66 337 aa17.72■□□□□ 0.43
CLN6-212ENST00000636020 MON1BQ7L1V2 547 aa17.72■□□□□ 0.43
CLN6-212ENST00000636020 ZNF547Q8IVP9 402 aa17.72■□□□□ 0.43
CLN6-212ENST00000636020 PARP9Q8IXQ6 854 aa17.72■□□□□ 0.43
CLN6-212ENST00000636020 PEBP4Q96S96 227 aa17.72■□□□□ 0.43
CLN6-212ENST00000636020 CWC15Q9P013 229 aaKnown RBP17.72■□□□□ 0.43
CLN6-212ENST00000636020 TRIM10Q9UDY6 481 aa17.72■□□□□ 0.43
CLN6-212ENST00000636020 CHKBQ9Y259 395 aa17.72■□□□□ 0.43
CLN6-212ENST00000636020 WDR37Q9Y2I8 494 aa17.72■□□□□ 0.43
CLN6-212ENST00000636020 RGSL1A5PLK6 1076 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 KLF7O75840 302 aaPredicted RBP17.71■□□□□ 0.43
CLN6-212ENST00000636020 SLC25A14O95258 325 aaPredicted RBP17.71■□□□□ 0.43
CLN6-212ENST00000636020 IGHEP01854 428 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 CAPN3P20807 821 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 IDSP22304 550 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 HADHAP40939 763 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 SSPNQ14714 243 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 PLCL1Q15111 1095 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 PTCHD3Q3KNS1 767 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 TMTC4Q5T4D3 741 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 LRRTM4Q86VH4 590 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 TTC30BQ8N4P2 665 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 GPR150Q8NGU9 434 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 NSMCE1Q8WV22 266 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 SLX1AQ9BQ83 275 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 NT5MQ9NPB1 228 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 PKD2L2Q9NZM6 624 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 PCSK1NQ9UHG2 260 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 BTRCQ9Y297 605 aa17.71■□□□□ 0.43
CLN6-212ENST00000636020 C1orf232A0A0U1RR37 186 aa17.7■□□□□ 0.42
CLN6-212ENST00000636020 MASP2O00187 686 aa17.7■□□□□ 0.42
CLN6-212ENST00000636020 LCA5LO95447 670 aa17.7■□□□□ 0.42
CLN6-212ENST00000636020 DESP17661 470 aa17.7■□□□□ 0.42
CLN6-212ENST00000636020 SSTR2P30874 369 aa17.7■□□□□ 0.42
CLN6-212ENST00000636020 HIF1AQ16665 826 aa17.7■□□□□ 0.42
CLN6-212ENST00000636020 VWA2Q5GFL6 755 aa17.7■□□□□ 0.42
CLN6-212ENST00000636020 DCUN1D2Q6PH85 259 aa17.7■□□□□ 0.42
CLN6-212ENST00000636020 CYP4V2Q6ZWL3 525 aaPredicted RBP17.7■□□□□ 0.42
CLN6-212ENST00000636020 TEX26Q8N6G2 289 aa17.7■□□□□ 0.42
CLN6-212ENST00000636020 PPP4R1Q8TF05 950 aa17.7■□□□□ 0.42
CLN6-212ENST00000636020 AGAP3Q96P47 875 aa17.7■□□□□ 0.42
CLN6-212ENST00000636020 DHRS4Q9BTZ2 278 aa17.7■□□□□ 0.42
CLN6-212ENST00000636020 ACTR5Q9H9F9 607 aaPredicted RBP17.7■□□□□ 0.42
CLN6-212ENST00000636020 ETNK2Q9NVF9 386 aa17.7■□□□□ 0.42
CLN6-212ENST00000636020 PADI2Q9Y2J8 665 aa17.7■□□□□ 0.42
CLN6-212ENST00000636020 OR5K3A6NET4 321 aa17.69■□□□□ 0.42
CLN6-212ENST00000636020 PEX12O00623 359 aa17.69■□□□□ 0.42
CLN6-212ENST00000636020 PRKCSHP14314 528 aaPredicted RBP17.69■□□□□ 0.42
CLN6-212ENST00000636020 ZNF135P52742 658 aaPredicted RBP17.69■□□□□ 0.42
CLN6-212ENST00000636020 CDH6P55285 790 aa17.69■□□□□ 0.42
CLN6-212ENST00000636020 ANKRD20A8PQ5CZ79 823 aa17.69■□□□□ 0.42
CLN6-212ENST00000636020 ZNF789Q5FWF6 425 aa17.69■□□□□ 0.42
CLN6-212ENST00000636020 ZNF569Q5MCW4 686 aa17.69■□□□□ 0.42
CLN6-212ENST00000636020 MRGPRGQ86SM5 289 aa17.69■□□□□ 0.42
CLN6-212ENST00000636020 CDH24Q86UP0 819 aa17.69■□□□□ 0.42
CLN6-212ENST00000636020 ZNF808Q8N4W9 903 aaPredicted RBP17.69■□□□□ 0.42
CLN6-212ENST00000636020 COG1Q8WTW3 980 aa17.69■□□□□ 0.42
CLN6-212ENST00000636020 TUBGCP2Q9BSJ2 902 aa17.69■□□□□ 0.42
CLN6-212ENST00000636020 SPATA16Q9BXB7 569 aa17.69■□□□□ 0.42
CLN6-212ENST00000636020 TDRD1Q9BXT4 1180 aaKnown RBP17.69■□□□□ 0.42
CLN6-212ENST00000636020 HRASLS2Q9NWW9 162 aa17.69■□□□□ 0.42
CLN6-212ENST00000636020 P4HTMQ9NXG6 502 aa17.69■□□□□ 0.42
CLN6-212ENST00000636020 CCDC88CQ9P219 2028 aa17.69■□□□□ 0.42
CLN6-212ENST00000636020 C9J4A7 227 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 DDX3YO15523 660 aaKnown RBP17.68■□□□□ 0.42
CLN6-212ENST00000636020 LDB2O43679 373 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 VEGFDO43915 354 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 JRKO75564 520 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 SOX5P35711 763 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 HALP42357 657 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 RPL26P61254 145 aaKnown RBP17.68■□□□□ 0.42
CLN6-212ENST00000636020 ITKQ08881 620 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 CDC16Q13042 620 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 FBXO38Q6PIJ6 1188 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 IGFL2Q6UWQ7 119 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 C11orf96Q7Z7L8 435 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 MMP21Q8N119 569 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 CARFQ8N187 725 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 ATPAF2Q8N5M1 289 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 OR1L3Q8NH93 324 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 DNAJB14Q8TBM8 379 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 CCHCR1Q8TD31 782 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 GLYATL1Q969I3 302 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 HDAC11Q96DB2 347 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 PPM1MQ96MI6 270 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 DPH2Q9BQC3 489 aaPredicted RBP17.68■□□□□ 0.42
CLN6-212ENST00000636020 TLR10Q9BXR5 811 aa17.68■□□□□ 0.42
CLN6-212ENST00000636020 GANQ9H2C0 597 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms