RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 PAFAH2Q99487 392 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 ATXN10Q9UBB4 475 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 RAB23Q9ULC3 237 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 LAMA1P25391 3075 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 IGLV3-16A0A075B6K0 115 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 TMEM120BA0PK00 339 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 SMIM23A6NLE4 172 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 OR2AG2A6NM03 316 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 PRMT5O14744 637 aaPredicted RBP14.25□□□□□ -0.13
LINC00339-208ENST00000634934 VEGFDO43915 354 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 ATP1B2P14415 290 aaPredicted RBP14.25□□□□□ -0.13
LINC00339-208ENST00000634934 KELP23276 732 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 GP5P40197 560 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 CSNK1EP49674 416 aaKnown RBP14.25□□□□□ -0.13
LINC00339-208ENST00000634934 AFF3P51826 1226 aaKnown RBP14.25□□□□□ -0.13
LINC00339-208ENST00000634934 MNAT1P51948 309 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 SLC22A18ASQ8N1D0 253 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 RASGEF1AQ8N9B8 481 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 SLC44A1Q8WWI5 657 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 SGF29Q96ES7 293 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 WDR92Q96MX6 357 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 CCDC68Q9H2F9 335 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 TMEM74BQ9NUR3 256 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 SUSD2Q9UGT4 822 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 SLC24A2Q9UI40 661 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 PILRBQ9UKJ0 227 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 ARL2BPQ9Y2Y0 163 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 PRSS21Q9Y6M0 314 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 ZNF292O60281 2723 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 A0A1B0GTW7 788 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 PRR5-ARHGAP8B1AHC4 643 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 TLR4O00206 839 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 CEACAM5P06731 702 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 ZNF8P17098 575 aaPredicted RBP14.24□□□□□ -0.13
LINC00339-208ENST00000634934 SLCO1A2P46721 670 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 CSE1LP55060 971 aaKnown RBP14.24□□□□□ -0.13
LINC00339-208ENST00000634934 C21orf59P57076 290 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 OVGP1Q12889 678 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 PTK2BQ14289 1009 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 TEAD4Q15561 434 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 GRTP1Q5TC63 336 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 PTRHD1Q6GMV3 140 aaKnown RBP14.24□□□□□ -0.13
LINC00339-208ENST00000634934 TMEM220Q6QAJ8 160 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 GALNT7Q86SF2 657 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 IQCHQ86VS3 1027 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 ZC3HC1Q86WB0 502 aaKnown RBP14.24□□□□□ -0.13
LINC00339-208ENST00000634934 TRAPPC5Q8IUR0 188 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 SYT12Q8IV01 421 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 DCLK2Q8N568 766 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 GPATCH11Q8N954 259 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 OR56A4Q8NGH8 313 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 SKA1Q96BD8 255 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 NDNQ99608 321 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 FGF22Q9HCT0 170 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 MRPL40Q9NQ50 206 aaKnown RBP14.24□□□□□ -0.13
LINC00339-208ENST00000634934 KLQ9UEF7 1012 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 GNPTGQ9UJJ9 305 aa14.24□□□□□ -0.13
LINC00339-208ENST00000634934 OTOGLQ3ZCN5 2332 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 DNAH14Q0VDD8 3507 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 GFRA3O60609 400 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 MAGEC1O60732 1142 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 AP2A2O94973 939 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 VIMP08670 466 aaKnown RBP14.23□□□□□ -0.13
LINC00339-208ENST00000634934 SAT1P21673 171 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 SPRP35270 261 aaPredicted RBP14.23□□□□□ -0.13
LINC00339-208ENST00000634934 CTSCP53634 463 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 CCDC6Q16204 474 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 SPRED3Q2MJR0 410 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 CRTC3Q6UUV7 619 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 MACC1Q6ZN28 852 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 RD3Q7Z3Z2 195 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 DCP2Q8IU60 420 aaKnown RBP14.23□□□□□ -0.13
LINC00339-208ENST00000634934 CFAP61Q8NHU2 1237 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 DCAKDQ8WVC6 231 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 TSACCQ96A04 125 aaPredicted RBP14.23□□□□□ -0.13
LINC00339-208ENST00000634934 VPS39Q96JC1 886 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 BIRC8Q96P09 236 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 RBBP8Q99708 897 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 P2RY12Q9H244 342 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 RHOJQ9H4E5 214 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 CYP4F12Q9HCS2 524 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 ZNHIT2Q9UHR6 403 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 SLC17A4Q9Y2C5 497 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 PRKAB1Q9Y478 270 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 PCDHB1Q9Y5F3 818 aa14.23□□□□□ -0.13
LINC00339-208ENST00000634934 SPTY2D1-AS1A0A0U1RR47 76 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 A0A1B0GVT2 93 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 IQCF5A8MTL0 148 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 SCAMP1O15126 338 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 VILLO15195 856 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 GRID2O43424 1007 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 NUAK1O60285 661 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 ATP5HO75947 161 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 ESR1P03372 595 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 OR56A5P0C7T3 313 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 PKMP14618 531 aaKnown RBP14.22□□□□□ -0.13
LINC00339-208ENST00000634934 ITGB6P18564 788 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 RPS3P23396 243 aaKnown RBP eCLIP14.22□□□□□ -0.13
LINC00339-208ENST00000634934 GCAP28676 217 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 DPP6P42658 865 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms