RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 CLYBLQ8N0X4 340 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 PTGR2Q8N8N7 351 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 ENDOVQ8N8Q3 282 aaKnown RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 PTERQ96BW5 349 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 ZNF641Q96N77 438 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 GPR21Q99679 349 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 OCSTAMPQ9BR26 566 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 SLC2A11Q9BYW1 496 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 CLPBQ9H078 707 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 WDR55Q9H6Y2 383 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 MEAF6Q9HAF1 191 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 BPIFA1Q9NP55 256 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 PLK2Q9NYY3 685 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 LAMP5Q9UJQ1 280 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 PLA2G4CQ9UP65 541 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 HS3ST2Q9Y278 367 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 TRAF6Q9Y4K3 522 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 HIDE1A8MVS5 230 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 STX16-NPEPL1H3BU86 382 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 K7ERQ8 282 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 STX16O14662 325 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 FOXD2O60548 495 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-230ENST00000634433 PEX11AO75192 247 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 RHOP08100 348 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 FGF4P08620 206 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 HNRNPLP14866 589 aaKnown RBP eCLIP7.07□□□□□ -1.283e-6■■■■□ 22.6
BRCA1-230ENST00000634433 GJA1P17302 382 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 CTPS1P17812 591 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 KCNA5P22460 613 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 RPS3P23396 243 aaKnown RBP eCLIP7.07□□□□□ -1.28
BRCA1-230ENST00000634433 PIK3R1P27986 724 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 CPOXP36551 454 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 CCR10P46092 362 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 MAN2A2P49641 1150 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 INHBCP55103 352 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 POLR2LP62875 67 aaKnown RBP7.07□□□□□ -1.28
BRCA1-230ENST00000634433 PLIN5Q00G26 463 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 TMED1Q13445 227 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 CYLC2Q14093 348 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-230ENST00000634433 TEAD2Q15562 447 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 CRY1Q16526 586 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 EML3Q32P44 896 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 UNC50Q53HI1 259 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 WLSQ5T9L3 541 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 ANKS6Q68DC2 871 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 PSAPL1Q6NUJ1 521 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 C16orf89Q6UX73 402 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 USP45Q70EL2 814 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 LYSMD3Q7Z3D4 306 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 GPR155Q7Z3F1 870 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 SNX20Q7Z614 316 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 GALNT12Q8IXK2 581 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 PIANPQ8IYJ0 282 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 ULK2Q8IYT8 1036 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 RBFAQ8N0V3 343 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 FBXO39Q8N4B4 442 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 RIN3Q8TB24 985 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 IRF7Q92985 503 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 PDLIM5Q96HC4 596 aaKnown RBP7.07□□□□□ -1.28
BRCA1-230ENST00000634433 RSRC1Q96IZ7 334 aaKnown RBP7.07□□□□□ -1.28
BRCA1-230ENST00000634433 LMLNQ96KR4 655 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 DMRTB1Q96MA1 342 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 BIRC8Q96P09 236 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 LYSMD1Q96S90 227 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 ATOH8Q96SQ7 321 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 SERPINI1Q99574 410 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 SHCBP1LQ9BZQ2 653 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 GSTO2Q9H4Y5 243 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 ZDHHC7Q9NXF8 308 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 HECAQ9UBI9 543 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-230ENST00000634433 GNPTGQ9UJJ9 305 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 SLC8A2Q9UPR5 921 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 PPIL1Q9Y3C6 166 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 KIAA1671Q9BY89 1806 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 C1orf232A0A0U1RR37 186 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 KLHL33A6NCF5 533 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 CAPN8A6NHC0 703 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 SUPT3HB4E1H0 165 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 C5orf67F2Z3F1 127 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 SDHDO14521 159 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 VPS4BO75351 444 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 FBXO24O75426 580 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 SUPT3HO75486 399 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 ANP32DO95626 131 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 PRSS56P0CW18 603 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 SRCP12931 536 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 SPAM1P38567 509 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 NNMTP40261 264 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 RECQLP46063 649 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-230ENST00000634433 SOX9P48436 509 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 KCNC1P48547 511 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 RGS4P49798 205 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 ECT2LQ008S8 904 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 CDC16Q13042 620 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 CUL3Q13618 768 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 OR4D1Q15615 310 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 CCDC6Q16204 474 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 PFKFB4Q16877 469 aa7.07□□□□□ -1.28
BRCA1-230ENST00000634433 PREPLQ4J6C6 727 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-230ENST00000634433 CARD16Q5EG05 197 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms