RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 CCL22O00626 93 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 GAPDHSO14556 408 aaPredicted RBP7.67□□□□□ -1.18
NR1I3-235ENST00000628566 LIN7AO14910 233 aaPredicted RBP7.67□□□□□ -1.18
NR1I3-235ENST00000628566 GPR39O43194 453 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 DUX1O43812 170 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 HYAL3O43820 417 aaPredicted RBP7.67□□□□□ -1.18
NR1I3-235ENST00000628566 NOBOXO60393 691 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 USP1O94782 785 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 TMEM63AO94886 807 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 DKK1O94907 266 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 VAPBO95292 243 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 MT-CO3P00414 261 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 RPLP0P05388 317 aaKnown RBP7.67□□□□□ -1.18
NR1I3-235ENST00000628566 CTAGE8P0CG41 777 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 PGAM1P18669 254 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 NDUFS1P28331 727 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 ALDH4A1P30038 563 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 PBLDP30039 288 aaPredicted RBP7.67□□□□□ -1.18
NR1I3-235ENST00000628566 FOXN2P32314 431 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 PTGIRP43119 386 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 ARSDP51689 593 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 CTSCP53634 463 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 EPHA4P54764 986 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 CRADDP78560 199 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 C2orf54Q08AI8 447 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 ILF2Q12905 390 aaKnown RBP7.67□□□□□ -1.18
NR1I3-235ENST00000628566 RPA4Q13156 261 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 TMED2Q15363 201 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 SEPT7Q16181 437 aaKnown RBP7.67□□□□□ -1.18
NR1I3-235ENST00000628566 DBN1Q16643 649 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 HIF1AQ16665 826 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 LONRF1Q17RB8 773 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 MAP9Q49MG5 647 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 KCTD16Q68DU8 428 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 PTRHD1Q6GMV3 140 aaKnown RBP7.67□□□□□ -1.18
NR1I3-235ENST00000628566 C8orf74Q6P047 294 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 ABRAXAS1Q6UWZ7 409 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 CEP128Q6ZU80 1094 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 CENPUQ71F23 418 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 CTAGE6Q86UF2 777 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 PIM3Q86V86 326 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 CAND1Q86VP6 1230 aaKnown RBP7.67□□□□□ -1.18
NR1I3-235ENST00000628566 ZNF547Q8IVP9 402 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 CTAGE4Q8IX94 777 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 NAGSQ8N159 534 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 CEP112Q8N8E3 955 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.67□□□□□ -1.18
NR1I3-235ENST00000628566 SLC37A2Q8TED4 501 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 ZNF669Q96BR6 464 aaPredicted RBP7.67□□□□□ -1.18
NR1I3-235ENST00000628566 ERP44Q9BS26 406 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 FAM167BQ9BTA0 163 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 SCNM1Q9BWG6 230 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 TRIM31Q9BZY9 425 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 LRRN3Q9H3W5 708 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 EPB41L5Q9HCM4 733 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 TREX1Q9NSU2 369 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 KCNK4Q9NYG8 393 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 CPNE7Q9UBL6 633 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 TBC1D29Q9UFV1 150 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 SLC2A6Q9UGQ3 507 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 TMPRSS11EQ9UL52 423 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 MSRB2Q9Y3D2 182 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 PCDHB1Q9Y5F3 818 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 MRFAP1Q9Y605 127 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 RPS6KL1Q9Y6S9 549 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 RNF215Q9Y6U7 377 aa7.67□□□□□ -1.18
NR1I3-235ENST00000628566 LY6G6EA0A0G2JKS1 128 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 UBA6A0AVT1 1052 aaPredicted RBP7.66□□□□□ -1.18
NR1I3-235ENST00000628566 TMEM8BA6NDV4 472 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 PRMT5O14744 637 aaPredicted RBP7.66□□□□□ -1.18
NR1I3-235ENST00000628566 AVILO75366 819 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 SEC31AO94979 1220 aaKnown RBP7.66□□□□□ -1.18
NR1I3-235ENST00000628566 CPNE6O95741 557 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 RPN2P04844 631 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 APOA4P06727 396 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 MYF5P13349 255 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 XRCC1P18887 633 aaPredicted RBP7.66□□□□□ -1.18
NR1I3-235ENST00000628566 OGNP20774 298 aaKnown RBP7.66□□□□□ -1.18
NR1I3-235ENST00000628566 RPL10P27635 214 aaKnown RBP7.66□□□□□ -1.18
NR1I3-235ENST00000628566 NMBRP28336 390 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 ITGA8P53708 1063 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 MAZP56270 477 aaKnown RBP7.66□□□□□ -1.18
NR1I3-235ENST00000628566 INSM1Q01101 510 aaPredicted RBP7.66□□□□□ -1.18
NR1I3-235ENST00000628566 EIF3IQ13347 325 aaKnown RBP7.66□□□□□ -1.18
NR1I3-235ENST00000628566 NFE2L1Q14494 772 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 NR1D2Q14995 579 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 PLCL1Q15111 1095 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 BBS9Q3SYG4 887 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 ANKRD20A4Q4UJ75 823 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 KHDC1Q4VXA5 237 aaKnown RBP7.66□□□□□ -1.18
NR1I3-235ENST00000628566 SPANXN3Q5MJ09 141 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 ANKRD22Q5VYY1 191 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 METRNLQ641Q3 311 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 HIBCHQ6NVY1 386 aaPredicted RBP7.66□□□□□ -1.18
NR1I3-235ENST00000628566 NEPROQ6NW34 567 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 ZNF534Q76KX8 674 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 ZNF572Q7Z3I7 529 aaPredicted RBP7.66□□□□□ -1.18
NR1I3-235ENST00000628566 ZNF438Q7Z4V0 828 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 SPRED1Q7Z699 444 aa7.66□□□□□ -1.18
NR1I3-235ENST00000628566 TMEM135Q86UB9 458 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms