RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 PIPSLA2A3N6 862 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 CDC14CA4D256 554 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 PDGFAP04085 211 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 FOLR1P15328 257 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 TPM4P67936 248 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 TUBB3Q13509 450 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 PRKD1Q15139 912 aaPredicted RBP16.14■□□□□ 0.17
TRIM29-221ENST00000627238 PCSK7Q16549 785 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 CCDC70Q6NSX1 233 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 SYVN1Q86TM6 617 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 AMZ2Q86W34 360 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 D2HGDHQ8N465 521 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 TTC30BQ8N4P2 665 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 SIDT2Q8NBJ9 832 aaKnown RBP16.14■□□□□ 0.17
TRIM29-221ENST00000627238 GPR150Q8NGU9 434 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 OR8K5Q8NH50 307 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 CPLX3Q8WVH0 158 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 ELMO2Q96JJ3 720 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 ZNF514Q96K75 400 aaPredicted RBP16.14■□□□□ 0.17
TRIM29-221ENST00000627238 SMOXQ9NWM0 555 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 HACD3Q9P035 362 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 IL17CQ9P0M4 197 aa16.14■□□□□ 0.17
TRIM29-221ENST00000627238 RP1L1Q8IWN7 2480 aaPredicted RBP16.14■□□□□ 0.17
TRIM29-221ENST00000627238 KLHL33A6NCF5 533 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 TLCD2A6NGC4 264 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 SLC4A1P02730 911 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 PTPN3P26045 913 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 PTPN4P29074 926 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 CASP14P31944 242 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 NR2C2P49116 596 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 MLLT10P55197 1068 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 PPP1CAP62136 330 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 RPE65Q16518 533 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 LDLRAP1Q5SW96 308 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 ZFYVE27Q5T4F4 411 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 KDELC1Q6UW63 502 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 GALNT11Q8NCW6 608 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 TTC25Q96NG3 672 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 LRFN5Q96NI6 719 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 MAK16Q9BXY0 300 aaKnown RBP16.13■□□□□ 0.17
TRIM29-221ENST00000627238 LATS2Q9NRM7 1088 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 FGF21Q9NSA1 209 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 FAM153AQ9UHL3 310 aa16.13■□□□□ 0.17
TRIM29-221ENST00000627238 OR5K3A6NET4 321 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 LPOP22079 712 aaPredicted RBP16.12■□□□□ 0.17
TRIM29-221ENST00000627238 CD68P34810 354 aaPredicted RBP16.12■□□□□ 0.17
TRIM29-221ENST00000627238 SPAM1P38567 509 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 TUBB4BP68371 445 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 HSD11B2P80365 405 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 TUBB2AQ13885 445 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 MESDQ14696 234 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 TAZQ16635 292 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 IZUMO3Q5VZ72 239 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 METRNLQ641Q3 311 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 CAPRIN2Q6IMN6 1127 aaKnown RBP16.12■□□□□ 0.17
TRIM29-221ENST00000627238 CAVIN1Q6NZI2 390 aaKnown RBP16.12■□□□□ 0.17
TRIM29-221ENST00000627238 NPNTQ6UXI9 565 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 BZW1Q7L1Q6 419 aaKnown RBP16.12■□□□□ 0.17
TRIM29-221ENST00000627238 LUZP1Q86V48 1076 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 LURAP1LQ8IV03 231 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 RASGEF1AQ8N9B8 481 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 SLC35G2Q8TBE7 412 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 MAP3K3Q99759 626 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 TUBB2BQ9BVA1 445 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 TRIM55Q9BYV6 548 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 BPIFA1Q9NP55 256 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 PCDHGB7Q9Y5F8 929 aa16.12■□□□□ 0.17
TRIM29-221ENST00000627238 ICE1Q9Y2F5 2266 aa16.11■□□□□ 0.17
TRIM29-221ENST00000627238 BLACEA4D250 179 aa16.11■□□□□ 0.17
TRIM29-221ENST00000627238 GAPDHSO14556 408 aaPredicted RBP16.11■□□□□ 0.17
TRIM29-221ENST00000627238 CPNE3O75131 537 aaKnown RBP16.11■□□□□ 0.17
TRIM29-221ENST00000627238 PMPCBO75439 489 aa16.11■□□□□ 0.17
TRIM29-221ENST00000627238 POP7O75817 140 aaKnown RBP16.11■□□□□ 0.17
TRIM29-221ENST00000627238 MTHFD1P11586 935 aaKnown RBP16.11■□□□□ 0.17
TRIM29-221ENST00000627238 CTSCP53634 463 aa16.11■□□□□ 0.17
TRIM29-221ENST00000627238 RPS15P62841 145 aaKnown RBP16.11■□□□□ 0.17
TRIM29-221ENST00000627238 WASHC5Q12768 1159 aa16.11■□□□□ 0.17
TRIM29-221ENST00000627238 ITGA9Q13797 1035 aa16.11■□□□□ 0.17
TRIM29-221ENST00000627238 TCEAL1Q15170 157 aa16.11■□□□□ 0.17
TRIM29-221ENST00000627238 FAM182AQ5T1J6 154 aa16.11■□□□□ 0.17
TRIM29-221ENST00000627238 FAM83HQ6ZRV2 1179 aaPredicted RBP16.11■□□□□ 0.17
TRIM29-221ENST00000627238 RHOT2Q8IXI1 618 aa16.11■□□□□ 0.17
TRIM29-221ENST00000627238 GDAP1Q8TB36 358 aa16.11■□□□□ 0.17
TRIM29-221ENST00000627238 ZNF501Q96CX3 271 aaPredicted RBP16.11■□□□□ 0.17
TRIM29-221ENST00000627238 DNAJC7Q99615 494 aa16.11■□□□□ 0.17
TRIM29-221ENST00000627238 AKIRIN1Q9H9L7 192 aaPredicted RBP16.11■□□□□ 0.17
TRIM29-221ENST00000627238 DDX56Q9NY93 547 aaKnown RBP16.11■□□□□ 0.17
TRIM29-221ENST00000627238 TRIM10Q9UDY6 481 aa16.11■□□□□ 0.17
TRIM29-221ENST00000627238 FARSAQ9Y285 508 aaKnown RBP16.11■□□□□ 0.17
TRIM29-221ENST00000627238 BTRCQ9Y297 605 aa16.11■□□□□ 0.17
TRIM29-221ENST00000627238 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.11■□□□□ 0.17
TRIM29-221ENST00000627238 GLYATL1P3A0A0U1RQE8 302 aa16.1■□□□□ 0.17
TRIM29-221ENST00000627238 VPS4BO75351 444 aa16.1■□□□□ 0.17
TRIM29-221ENST00000627238 CEACAM4O75871 244 aa16.1■□□□□ 0.17
TRIM29-221ENST00000627238 DNAJB5O75953 348 aa16.1■□□□□ 0.17
TRIM29-221ENST00000627238 SORBS2O94875 1100 aaKnown RBP16.1■□□□□ 0.17
TRIM29-221ENST00000627238 ZBTB11O95625 1053 aaPredicted RBP16.1■□□□□ 0.17
TRIM29-221ENST00000627238 RAB40ALP0C0E4 278 aa16.1■□□□□ 0.17
TRIM29-221ENST00000627238 MSL3P1P0C860 447 aa16.1■□□□□ 0.17
TRIM29-221ENST00000627238 EBLN1P0CF75 366 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms